RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SPOPLQ6IQ16 392 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 PLPPR4Q7Z2D5 763 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 UBR7Q8N806 425 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 C18orf8Q96DM3 657 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 OTUD5Q96G74 571 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 VCPIP1Q96JH7 1222 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 GPR20Q99678 358 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 PAGR1Q9BTK6 254 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 PLVAPQ9BX97 442 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 MRPL4Q9BYD3 311 aaKnown RBP17.95■□□□□ 0.46
NUP50-202ENST00000396096 ANAPC7Q9UJX3 599 aa17.95■□□□□ 0.46
NUP50-202ENST00000396096 DNAJC25-GNG10A0A024R161 153 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 GOLGA6L10A6NI86 522 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 FSCN2O14926 492 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 EIF3HO15372 352 aaKnown RBP eCLIP17.94■□□□□ 0.46
NUP50-202ENST00000396096 TOM1L1O75674 476 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 ARIH2O95376 493 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 CALCAP01258 141 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 NSFP46459 744 aaKnown RBP17.94■□□□□ 0.46
NUP50-202ENST00000396096 NOP14P78316 857 aaKnown RBP17.94■□□□□ 0.46
NUP50-202ENST00000396096 DHX9Q08211 1270 aaKnown RBP17.94■□□□□ 0.46
NUP50-202ENST00000396096 ZNF844Q08AG5 666 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 DRP2Q13474 957 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 LY6KQ17RY6 165 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 TTC27Q6P3X3 843 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 WDR49Q8IV35 697 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 ABRAQ8N0Z2 381 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 SH2D3CQ8N5H7 860 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 OR5B17Q8NGF7 314 aa17.94■□□□□ 0.46
NUP50-202ENST00000396096 LOC102724159A0A0B4J2E5 919 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 ZBTB42B2RXF5 422 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 CLDN3O15551 220 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 ERLIN2O94905 339 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 MYZAPP0CAP1 466 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 RRM1P23921 792 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 COILP38432 576 aaPredicted RBP17.93■□□□□ 0.46
NUP50-202ENST00000396096 PTP4A2Q12974 167 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 PPIL2Q13356 520 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 MKRN4PQ13434 485 aaPredicted RBP17.93■□□□□ 0.46
NUP50-202ENST00000396096 MXD4Q14582 209 aaPredicted RBP17.93■□□□□ 0.46
NUP50-202ENST00000396096 PWP2Q15269 919 aaKnown RBP17.93■□□□□ 0.46
NUP50-202ENST00000396096 CELF3Q5SZQ8 465 aaKnown RBP17.93■□□□□ 0.46
NUP50-202ENST00000396096 KCTD16Q68DU8 428 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 CCDC137Q6PK04 289 aaKnown RBP17.93■□□□□ 0.46
NUP50-202ENST00000396096 ZDHHC24Q6UX98 284 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 RUFY4Q6ZNE9 571 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 PHF13Q86YI8 300 aaPredicted RBP17.93■□□□□ 0.46
NUP50-202ENST00000396096 SLCO2A1Q92959 643 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 FAM129AQ9BZQ8 928 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 LRRC19Q9H756 370 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 GRHL1Q9NZI5 618 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 NUB1Q9Y5A7 615 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 PCDHB4Q9Y5E5 795 aa17.93■□□□□ 0.46
NUP50-202ENST00000396096 RARAP10276 462 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 NR1D1P20393 614 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 ZNF132P52740 706 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 GNGT1P63211 74 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 NOMO3P69849 1222 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 MOGSQ13724 837 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 NCOA4Q13772 614 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 AGBL2Q5U5Z8 902 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 RBBP8NLQ8NC74 664 aaPredicted RBP17.92■□□□□ 0.46
NUP50-202ENST00000396096 UBLCP1Q8WVY7 318 aaPredicted RBP17.92■□□□□ 0.46
NUP50-202ENST00000396096 CPA5Q8WXQ8 436 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 CYFIP2Q96F07 1278 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 CLMNQ96JQ2 1002 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 ACO2Q99798 780 aaKnown RBP17.92■□□□□ 0.46
NUP50-202ENST00000396096 TRIM31Q9BZY9 425 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 C2orf40Q9H1Z8 148 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 R3HDMLQ9H3Y0 253 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 RBPJLQ9UBG7 517 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 PARP2Q9UGN5 583 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 TCRBV7S2A1N4TA0A589 114 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 ABLIM1O14639 778 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 ASS1P00966 412 aaKnown RBP17.92■□□□□ 0.46
NUP50-202ENST00000396096 GNA15P30679 374 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 MCL1Q07820 350 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 LAMTOR4Q0VGL1 99 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 SURF1Q15526 300 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 LIN9Q5TKA1 542 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 TXNRD2Q9NNW7 524 aa17.92■□□□□ 0.46
NUP50-202ENST00000396096 TTLL13PA6NNM8 815 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 MYO1FO00160 1098 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 OGTO15294 1046 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 PROSCO94903 275 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 POTEJP0CG39 1038 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 SLC26A2P50443 739 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 EIF3BP55884 814 aaKnown RBP17.91■□□□□ 0.46
NUP50-202ENST00000396096 CCDC62Q6P9F0 684 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 FOXR1Q6PIV2 292 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 TMEM270Q6UE05 265 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 EEPD1Q7L9B9 569 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 ZBTB8OSQ8IWT0 167 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 MAIP1Q8WWC4 291 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 JPH2Q9BR39 696 aaPredicted RBP17.91■□□□□ 0.46
NUP50-202ENST00000396096 SNX24Q9Y343 169 aa17.91■□□□□ 0.46
NUP50-202ENST00000396096 PRKCBP05771 671 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 PGK2P07205 417 aa17.9■□□□□ 0.46
NUP50-202ENST00000396096 NF2P35240 595 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms