RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 GMNCA6NCL1 334 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 RSPH10B2B2RC85 870 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 E7EVH7 732 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 B4GALT4O60513 344 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 KPNA6O60684 536 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 ITGBL1O95965 494 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 C4BPAP04003 597 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 RSPH10BP0C881 870 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 IDEP14735 1019 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 TM4SF4P48230 202 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 KIF11P52732 1056 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 STX17P56962 302 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 MRPS25P82663 173 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 DMP1Q13316 513 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 SLC5A9Q2M3M2 681 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 MEI1Q5TIA1 1274 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 TRIM72Q6ZMU5 477 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 KIAA1328Q86T90 577 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 ZNF410Q86VK4 478 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 TTC39CQ8N584 583 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 ACTRT1Q8TDG2 376 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 DDX1Q92499 740 aaKnown RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 STAMQ92783 540 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SPDL1Q96EA4 605 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SAAL1Q96ER3 474 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 RPS6KC1Q96S38 1066 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 NOD2Q9HC29 1040 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 NRBP2Q9NSY0 501 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS41-203ENST00000395969 SUCLA2Q9P2R7 463 aaPredicted RBP5.75□□□□□ -1.49
VPS41-203ENST00000395969 FRMD4BQ9Y2L6 1034 aa5.75□□□□□ -1.49
VPS41-203ENST00000395969 NPHP3-ACAD11A0A0J9YXS1 232 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 LRRC53A6NM62 1247 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 TRAF5O00463 557 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 HBP1O60381 514 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 MSCO60682 206 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 CYP1A2P05177 515 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 TCP1P17987 556 aaKnown RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 CTNNA2P26232 953 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 SNAP25P60880 206 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 PRKCEQ02156 737 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 PPP2R5EQ16537 467 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 IFI16Q16666 785 aaKnown RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 QPCTQ16769 361 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 EXOC3L4Q17RC7 722 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 ZACNQ401N2 412 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 ZC3H12AQ5D1E8 599 aaKnown RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 POTEHQ6S545 545 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 ARCQ7LC44 396 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 DYMQ7RTS9 669 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 CCDC60Q8IWA6 550 aaPredicted RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 TPH2Q8IWU9 490 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 HELQQ8TDG4 1101 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 OPTNQ96CV9 577 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 TBC1D31Q96DN5 1066 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 SEC16BQ96JE7 1060 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 SMARCAD1Q9H4L7 1026 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 TMBIM4Q9HC24 238 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 ZNF302Q9NR11 478 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 TCEAL9Q9UHQ7 104 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 CORO1CQ9ULV4 474 aaPredicted RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 USTQ9Y2C2 406 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 C15orf41Q9Y2V0 281 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 MANSC4A6NHS7 340 aaPredicted RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 GGPS1O95749 300 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 ALADP13716 330 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 CST5P28325 142 aaPredicted RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 STAT1P42224 750 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 VAMP7P51809 220 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 RPS6KA3P51812 740 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 SLC7A5Q01650 507 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 USP4Q13107 963 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 EMC2Q15006 297 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 RBBP5Q15291 538 aaKnown RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 ODR4Q5SWX8 454 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 CFAP58Q5T655 872 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 KLHL10Q6JEL2 608 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 WDR49Q8IV35 697 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 GPD1LQ8N335 351 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 GPRC5AQ8NFJ5 357 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 CCHCR1Q8TD31 782 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 SCFD2Q8WU76 684 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 NSMCE1Q8WV22 266 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 RSPH1Q8WYR4 309 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 HES6Q96HZ4 224 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 CCDC43Q96MW1 224 aaKnown RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 PARK7Q99497 189 aaKnown RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 HSPBP1Q9NZL4 362 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 GNEQ9Y223 722 aaKnown RBP5.74□□□□□ -1.49
VPS41-203ENST00000395969 TNFSF13BQ9Y275 285 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 GJA3Q9Y6H8 435 aa5.74□□□□□ -1.49
VPS41-203ENST00000395969 ZNF487B1APH4 448 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 ADM5C9JUS6 153 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 USO1O60763 962 aaKnown RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 IL18RAPO95256 599 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 CYP1A1P04798 512 aaPredicted RBP5.73□□□□□ -1.49
VPS41-203ENST00000395969 FESP07332 822 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 FAM153BP0C7A2 387 aa5.73□□□□□ -1.49
VPS41-203ENST00000395969 GLRA2P23416 452 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms