RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 ARHGAP18Q8N392 663 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 APPL2Q8NEU8 664 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 MOSPD1Q9UJG1 213 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 ARHGAP10A1A4S6 786 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 DPYSL4O14531 572 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 EIF3HO15372 352 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBFD1-201ENST00000395878 NR3C2P08235 984 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 FOXD4Q12950 439 aaPredicted RBP18.26■□□□□ 0.51
UBFD1-201ENST00000395878 UGP2Q16851 508 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 CDC42EP5Q6NZY7 148 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 RMDN1Q96DB5 314 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 MED15Q96RN5 788 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 NDFIP2Q9NV92 336 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 PIN4Q9Y237 131 aaKnown RBP18.26■□□□□ 0.51
UBFD1-201ENST00000395878 NEU2Q9Y3R4 380 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 PCDHB2Q9Y5E7 798 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 MYCP01106 439 aaPredicted RBP18.25■□□□□ 0.51
UBFD1-201ENST00000395878 KCNA2P16389 499 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 RPA1P27694 616 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 TMEM132DQ14C87 1099 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 EMC2Q15006 297 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 RANBP17Q9H2T7 1088 aaKnown RBP18.25■□□□□ 0.51
UBFD1-201ENST00000395878 MAP3K20Q9NYL2 800 aaKnown RBP18.25■□□□□ 0.51
UBFD1-201ENST00000395878 ZC3H7BQ9UGR2 993 aaKnown RBP18.25■□□□□ 0.51
UBFD1-201ENST00000395878 IL10P22301 178 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 RBBP7Q16576 425 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 CCT8L2Q96SF2 557 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 DDX50Q9BQ39 737 aaKnown RBP18.25■□□□□ 0.51
UBFD1-201ENST00000395878 VCPKMTQ9H867 229 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 TMEM8AQ9HCN3 771 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 TJP2Q9UDY2 1190 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 SNX9Q9Y5X1 595 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 SPAG6O75602 509 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 VEPH1Q14D04 833 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 JAMLQ86YT9 394 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 KRT35Q92764 455 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 KIF17Q9P2E2 1029 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 SLC9A1P19634 815 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 TSSK1BQ9BXA7 367 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 ROPN1BQ9BZX4 212 aaPredicted RBP18.25■□□□□ 0.51
UBFD1-201ENST00000395878 ROPN1Q9HAT0 212 aaPredicted RBP18.25■□□□□ 0.51
UBFD1-201ENST00000395878 TRIM10Q9UDY6 481 aa18.25■□□□□ 0.51
UBFD1-201ENST00000395878 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
UBFD1-201ENST00000395878 APRTP07741 180 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 LRRC8EQ6NSJ5 796 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 ZNF677Q86XU0 584 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 OR6J1Q8NGC5 347 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 ARL8AQ96BM9 186 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 MCEEQ96PE7 176 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 OSBPL1AQ9BXW6 950 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 ALG13Q9NP73 1137 aaKnown RBP18.24■□□□□ 0.51
UBFD1-201ENST00000395878 RAB6BQ9NRW1 208 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 MAGEB2O15479 319 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 IL18RAPO95256 599 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 PRR5LQ6MZQ0 368 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 SH2D3CQ8N5H7 860 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 ERGIC2Q96RQ1 377 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 USP15Q9Y4E8 981 aaPredicted RBP18.24■□□□□ 0.51
UBFD1-201ENST00000395878 CHD1O14646 1710 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 ZNF197O14709 1029 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 TRAPPC3O43617 180 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 FBXO33Q7Z6M2 555 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 AIPL1Q9NZN9 384 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 FAM47DPA6NHR8 397 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 CTDNEP1O95476 244 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 ATXN8OSP0DMR3 200 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 HOXD10P28358 340 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 SMAD1Q15797 465 aaKnown RBP18.24■□□□□ 0.51
UBFD1-201ENST00000395878 LONRF1Q17RB8 773 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 ATXN7L3BQ96GX2 97 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 JMJD4Q9H9V9 463 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 CHCHD3Q9NX63 227 aaKnown RBP18.24■□□□□ 0.51
UBFD1-201ENST00000395878 RNF181Q9P0P0 153 aa18.24■□□□□ 0.51
UBFD1-201ENST00000395878 XPO7Q9UIA9 1087 aaKnown RBP18.24■□□□□ 0.51
UBFD1-201ENST00000395878 GOLGA8RI6L899 631 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 MAFGO15525 162 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 SPATA2LQ8IUW3 424 aaPredicted RBP18.23■□□□□ 0.51
UBFD1-201ENST00000395878 MMGT1Q8N4V1 131 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 OR9Q1Q8NGQ5 310 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 SCFD1Q8WVM8 642 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 XPO6Q96QU8 1125 aaKnown RBP18.23■□□□□ 0.51
UBFD1-201ENST00000395878 MXRA8Q9BRK3 442 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 FAM167BQ9BTA0 163 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 OSBPL8Q9BZF1 889 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 RAD51CO43502 376 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 ABCE1P61221 599 aaKnown RBP18.23■□□□□ 0.51
UBFD1-201ENST00000395878 DNAL1Q4LDG9 190 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 GRAMD4Q6IC98 578 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 LZICQ8WZA0 190 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 NAF1Q96HR8 494 aaKnown RBP18.23■□□□□ 0.51
UBFD1-201ENST00000395878 STX18Q9P2W9 335 aaKnown RBP18.23■□□□□ 0.51
UBFD1-201ENST00000395878 RFX5P48382 616 aaPredicted RBP18.23■□□□□ 0.51
UBFD1-201ENST00000395878 ZNF200P98182 395 aaPredicted RBP18.23■□□□□ 0.51
UBFD1-201ENST00000395878 CENPCQ03188 943 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 STX3Q13277 289 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 DYNC1I2Q13409 638 aaKnown RBP18.23■□□□□ 0.51
UBFD1-201ENST00000395878 PTK2BQ14289 1009 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 RABGAP1LQ5R372 815 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 KLHDC7AQ5VTJ3 777 aa18.23■□□□□ 0.51
UBFD1-201ENST00000395878 AGGF1Q8N302 714 aaeCLIP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms