RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 INF2Q27J81 1249 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 VWA3BQ502W6 1294 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 TCEAL5Q5H9L2 206 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 CDC42EP5Q6NZY7 148 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 EEPD1Q7L9B9 569 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 FILIP1Q7Z7B0 1213 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 RPAINQ86UA6 219 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 ZNF227Q86WZ6 799 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 SYT8Q8NBV8 401 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 KLHDC9Q8NEP7 349 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 SMARCC2Q8TAQ2 1214 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 DIO2Q92813 273 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 MYD88Q99836 296 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 LGR4Q9BXB1 951 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 EPN3Q9H201 632 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 MFSD1Q9H3U5 465 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 BABAM1Q9NWV8 329 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 CD207Q9UJ71 328 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 MRPL42Q9Y6G3 142 aaKnown RBP6.59□□□□□ -1.35
AP3S1-202ENST00000395548 RFX7Q2KHR2 1363 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 ROBO3Q96MS0 1386 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 SALL1Q9NSC2 1324 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 SH3D21A4FU49 640 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 B2RBV5 119 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 AGRPO00253 132 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 MEFVO15553 781 aaPredicted RBP6.58□□□□□ -1.36
AP3S1-202ENST00000395548 PEX14O75381 377 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 BAIAP3O94812 1187 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 PDGFBP01127 241 aaPredicted RBP6.58□□□□□ -1.36
AP3S1-202ENST00000395548 SCG5P05408 212 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 FGRP09769 529 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 RFC2P35250 354 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 ECI1P42126 302 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 CHAF1AQ13111 956 aaPredicted RBP6.58□□□□□ -1.36
AP3S1-202ENST00000395548 CLUL1Q15846 466 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 MROH9Q5TGP6 573 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 LIPIQ6XZB0 460 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 TEX2Q8IWB9 1127 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 UBALD2Q8IYN6 164 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 SEC14L1Q92503 715 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 SECISBP2LQ93073 1101 aaKnown RBP6.58□□□□□ -1.36
AP3S1-202ENST00000395548 BORCS6Q96GS4 357 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 RAD9AQ99638 391 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 WNT8AQ9H1J5 351 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 IFT57Q9NWB7 429 aa6.58□□□□□ -1.36
AP3S1-202ENST00000395548 UMODL1Q5DID0 1318 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 CLSPNQ9HAW4 1339 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 EIF4E1BA6NMX2 242 aaKnown RBP6.57□□□□□ -1.36
AP3S1-202ENST00000395548 ASGR1P07306 291 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 CST5P28325 142 aaPredicted RBP6.57□□□□□ -1.36
AP3S1-202ENST00000395548 LTBRP36941 435 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 SLC6A11P48066 632 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 CYP4F3Q08477 520 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 UBE4AQ14139 1066 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 ACBD5Q5T8D3 534 aaPredicted RBP6.57□□□□□ -1.36
AP3S1-202ENST00000395548 CCSAPQ6IQ19 270 aaPredicted RBP6.57□□□□□ -1.36
AP3S1-202ENST00000395548 CEP68Q76N32 757 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 MCF2L2Q86YR7 1114 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 RIOX2Q8IUF8 465 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 ABRAQ8N0Z2 381 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 DCLK2Q8N568 766 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 SHCBP1Q8NEM2 672 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 DDX1Q92499 740 aaKnown RBP6.57□□□□□ -1.36
AP3S1-202ENST00000395548 TRMT2BQ96GJ1 504 aaKnown RBP6.57□□□□□ -1.36
AP3S1-202ENST00000395548 CFAP53Q96M91 514 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 SAMD11Q96NU1 681 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 HNRNPABQ99729 332 aaKnown RBP6.57□□□□□ -1.36
AP3S1-202ENST00000395548 PCDH12Q9NPG4 1184 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 USP40Q9NVE5 1235 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.57□□□□□ -1.36
AP3S1-202ENST00000395548 SIT1Q9Y3P8 196 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 DOCK1Q14185 1865 aa6.57□□□□□ -1.36
AP3S1-202ENST00000395548 SYNRGQ9UMZ2 1314 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 SPEF2Q9C093 1822 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 CCDC194A0A1B0GVG4 234 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 ANKRD18BA2A2Z9 1011 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 LCHNA4D1U4 455 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 TMEM8BA6NDV4 472 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 CYSRT1A8MQ03 144 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 PPP1R12AO14974 1030 aaPredicted RBP6.56□□□□□ -1.36
AP3S1-202ENST00000395548 TBX1O43435 398 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 DNAJC6O75061 913 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 CABYRO75952 493 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 EYA4O95677 639 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 ETV3LQ6ZN32 361 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 DEFB128Q7Z7B8 93 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 CKAP2LQ8IYA6 745 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 CCDC105Q8IYK2 499 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 TMEM169Q96HH4 297 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 SCLYQ96I15 445 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 MAML3Q96JK9 1138 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 PHF7Q9BWX1 381 aaPredicted RBP6.56□□□□□ -1.36
AP3S1-202ENST00000395548 FTOQ9C0B1 505 aaKnown RBP eCLIP6.56□□□□□ -1.36
AP3S1-202ENST00000395548 SIL1Q9H173 461 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 NCDNQ9UBB6 729 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 FAM184BQ9ULE4 1060 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 CNPY2Q9Y2B0 182 aa6.56□□□□□ -1.36
AP3S1-202ENST00000395548 COA3Q9Y2R0 106 aaPredicted RBP6.56□□□□□ -1.36
AP3S1-202ENST00000395548 KIF16BQ96L93 1317 aa6.55□□□□□ -1.36
AP3S1-202ENST00000395548 DSPP15924 2871 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms