RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 RAB20Q9NX57 234 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 CCDC188H7C350 402 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 NUDT17P0C025 328 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 AMHR2Q16671 573 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 HIBCHQ6NVY1 386 aaPredicted RBP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 FMNL3Q8IVF7 1028 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 ARFGAP1Q8N6T3 406 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 WHAMMQ8TF30 809 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 KIFAP3Q92845 792 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 TRIM51Q9BSJ1 452 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 TMOD4Q9NZQ9 345 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 SLC9A2Q9UBY0 812 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 KCNH4Q9UQ05 1017 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 DIS3Q9Y2L1 958 aaKnown RBP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 FSCN2O14926 492 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 ZC3H11AO75152 810 aaKnown RBP eCLIP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 SKAP2O75563 359 aaPredicted RBP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 DGAT1O75907 488 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 COMTP21964 271 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 CDH5P33151 784 aaPredicted RBP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 KRT39Q6A163 491 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 IFT20Q8IY31 132 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 CNPY4Q8N129 248 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 SPAG5Q96R06 1193 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 PI4K2AQ9BTU6 479 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 LRRC19Q9H756 370 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 CPSF2Q9P2I0 782 aaKnown RBP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 STK38LQ9Y2H1 464 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 ATXN2Q99700 1313 aaKnown RBP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 EIF3HO15372 352 aaKnown RBP eCLIP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 SHBGP04278 402 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 SWSAP1Q6NVH7 229 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 CYP4V2Q6ZWL3 525 aaPredicted RBP10.99□□□□□ -0.65
HIF1A-203ENST00000394997 GPC2Q8N158 579 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 OR5B17Q8NGF7 314 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 ART4Q93070 314 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 TEX13BQ9BXU2 312 aa10.99□□□□□ -0.65
HIF1A-203ENST00000394997 DAPK3O43293 454 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 TCF4P15884 667 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 ELF1P32519 619 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 RPL21P46778 160 aaKnown RBP10.98□□□□□ -0.65
HIF1A-203ENST00000394997 CUL1Q13616 776 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 KRT71Q3SY84 523 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 NSUN6Q8TEA1 469 aaKnown RBP10.98□□□□□ -0.65
HIF1A-203ENST00000394997 TRIM6Q9C030 488 aaPredicted RBP10.98□□□□□ -0.65
HIF1A-203ENST00000394997 TMEM134Q9H6X4 195 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 GTF3C4Q9UKN8 822 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 EXTL3O43909 919 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 MYZAPP0CAP1 466 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 NR1D1P20393 614 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 MXI1P50539 228 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 CBLBQ13191 982 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 TAZQ16635 292 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 SPRED3Q2MJR0 410 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 ARHGEF16Q5VV41 709 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 TCERG1LQ5VWI1 586 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 TRIM68Q6AZZ1 485 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 ACAD10Q6JQN1 1059 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 DAAM2Q86T65 1068 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 MCOLN2Q8IZK6 566 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 CACNA2D3Q8IZS8 1091 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 GPD1LQ8N335 351 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 SLC17A8Q8NDX2 589 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 OR2W6PQ8NHA6 318 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 UHMK1Q8TAS1 419 aaKnown RBP10.98□□□□□ -0.65
HIF1A-203ENST00000394997 GLG1Q92896 1179 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 AVENQ9NQS1 362 aaPredicted RBP10.98□□□□□ -0.65
HIF1A-203ENST00000394997 GGA3Q9NZ52 723 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 CYTH4Q9UIA0 394 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 NUB1Q9Y5A7 615 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 MAFO75444 373 aaPredicted RBP10.98□□□□□ -0.65
HIF1A-203ENST00000394997 FGGP02679 453 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 HOXC6P09630 235 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 RARAP10276 462 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 NOMO3P69849 1222 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 PAK2Q13177 524 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 EMC2Q15006 297 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 Q3C1V9 767 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 DAB2IPQ5VWQ8 1189 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 SPOPLQ6IQ16 392 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 HS2ST1Q7LGA3 356 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 ANKS4BQ8N8V4 417 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 ACAD9Q9H845 621 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 KLC4Q9NSK0 619 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 GJD2Q9UKL4 321 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 NME7Q9Y5B8 376 aa10.98□□□□□ -0.65
HIF1A-203ENST00000394997 SRRM3A6NNA2 597 aaPredicted RBP10.97□□□□□ -0.65
HIF1A-203ENST00000394997 CST3P01034 146 aaPredicted RBP10.97□□□□□ -0.65
HIF1A-203ENST00000394997 OATP04181 439 aa10.97□□□□□ -0.65
HIF1A-203ENST00000394997 GCAP28676 217 aa10.97□□□□□ -0.65
HIF1A-203ENST00000394997 OGDHQ02218 1023 aa10.97□□□□□ -0.65
HIF1A-203ENST00000394997 ZNF211Q13398 564 aaPredicted RBP10.97□□□□□ -0.65
HIF1A-203ENST00000394997 ARHGAP44Q17R89 818 aa10.97□□□□□ -0.65
HIF1A-203ENST00000394997 PLEKHA7Q6IQ23 1121 aa10.97□□□□□ -0.65
HIF1A-203ENST00000394997 APOBEC3FQ8IUX4 373 aaKnown RBP10.97□□□□□ -0.65
HIF1A-203ENST00000394997 RHOT2Q8IXI1 618 aa10.97□□□□□ -0.65
HIF1A-203ENST00000394997 RBPJLQ9UBG7 517 aa10.97□□□□□ -0.65
HIF1A-203ENST00000394997 C5orf60A6NFR6 353 aa10.97□□□□□ -0.65
HIF1A-203ENST00000394997 TNFSF9P41273 254 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms