RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.59■■□□□ 1.05
SNCA-203ENST00000394986 C2CD2LO14523 706 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 PPEF2O14830 753 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 PER2O15055 1255 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 EXOC3O60645 756 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 NR3C1P04150 777 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 BMP6P22004 513 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 NRIP1P48552 1158 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 SMC1AQ14683 1233 aaKnown RBP21.59■■□□□ 1.05
SNCA-203ENST00000394986 PTPN14Q15678 1187 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 SPATA1Q5VX52 437 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 DCLRE1AQ6PJP8 1040 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 DDX27Q96GQ7 796 aaKnown RBP21.59■■□□□ 1.05
SNCA-203ENST00000394986 IGFLR1Q9H665 355 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 NGRNQ9NPE2 291 aaKnown RBP21.59■■□□□ 1.05
SNCA-203ENST00000394986 DMAC2Q9NW81 257 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 DERAQ9Y315 318 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 C2CD2Q9Y426 696 aa21.59■■□□□ 1.05
SNCA-203ENST00000394986 SF3B1O75533 1304 aaKnown RBP eCLIP21.58■■□□□ 1.053e-6■■■■■ 137.9
SNCA-203ENST00000394986 PTPRJQ12913 1337 aa21.58■■□□□ 1.05
SNCA-203ENST00000394986 TMEM189-UBE2V1I3L0A0 370 aa21.58■■□□□ 1.05
SNCA-203ENST00000394986 CALUO43852 315 aaPredicted RBP21.58■■□□□ 1.05
SNCA-203ENST00000394986 CXCL14O95715 111 aa21.58■■□□□ 1.05
SNCA-203ENST00000394986 CD44P16070 742 aaKnown RBP21.58■■□□□ 1.05
SNCA-203ENST00000394986 CYP3A5P20815 502 aa21.58■■□□□ 1.05
SNCA-203ENST00000394986 RPL9P32969 192 aaKnown RBP21.58■■□□□ 1.05
SNCA-203ENST00000394986 TFAMQ00059 246 aaKnown RBP21.58■■□□□ 1.05
SNCA-203ENST00000394986 MORC3Q14149 939 aa21.58■■□□□ 1.05
SNCA-203ENST00000394986 BEST2Q8NFU1 509 aa21.58■■□□□ 1.05
SNCA-203ENST00000394986 KIAA1586Q9HCI6 787 aa21.58■■□□□ 1.05
SNCA-203ENST00000394986 TRAF3IP3Q9Y228 551 aa21.58■■□□□ 1.05
SNCA-203ENST00000394986 C2orf71A6NGG8 1288 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 LINC01565O15544 149 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 XPOTO43592 962 aaKnown RBP21.57■■□□□ 1.04
SNCA-203ENST00000394986 LRPAP1P30533 357 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 GLUD2P49448 558 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 CASP4P49662 377 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 CYP24A1Q07973 514 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 ZCWPW2Q504Y3 356 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 FAM171A1Q5VUB5 890 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 SCARA3Q6AZY7 606 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 PDE12Q6L8Q7 609 aaKnown RBP21.57■■□□□ 1.04
SNCA-203ENST00000394986 ADSSL1Q8N142 457 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 MRPL43Q8N983 215 aaKnown RBP21.57■■□□□ 1.04
SNCA-203ENST00000394986 TSPAN18Q96SJ8 248 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 NUP62CLQ9H1M0 184 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 KIAA1468Q9P260 1216 aa21.57■■□□□ 1.04
SNCA-203ENST00000394986 URODP06132 367 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 NR2F2P24468 414 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 PMS1P54277 932 aaKnown RBP21.56■■□□□ 1.04
SNCA-203ENST00000394986 RBM10P98175 930 aaKnown RBP21.56■■□□□ 1.04
SNCA-203ENST00000394986 COBLL1Q53SF7 1204 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 RTP2Q5QGT7 225 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 CEP57Q86XR8 500 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 SLC9A9Q8IVB4 645 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 CCDC127Q96BQ5 260 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 EEF2KMTQ96G04 330 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 GZF1Q9H116 711 aaPredicted RBP21.56■■□□□ 1.04
SNCA-203ENST00000394986 TLE6Q9H808 572 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 CHST7Q9NS84 486 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 DPP3Q9NY33 737 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 NUB1Q9Y5A7 615 aa21.56■■□□□ 1.04
SNCA-203ENST00000394986 PDCD11Q14690 1871 aaKnown RBP21.56■■□□□ 1.04
SNCA-203ENST00000394986 TRIM49BA6NDI0 452 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 USP41Q3LFD5 358 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 KIAA0319Q5VV43 1072 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 C9orf57Q5W0N0 161 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 CEP135Q66GS9 1140 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 KIAA1841Q6NSI8 718 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 OR5B17Q8NGF7 314 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 PLEKHO2Q8TD55 490 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 RIN2Q8WYP3 895 aaPredicted RBP21.55■■□□□ 1.04
SNCA-203ENST00000394986 POP1Q99575 1024 aaKnown RBP21.55■■□□□ 1.04
SNCA-203ENST00000394986 MTMR12Q9C0I1 747 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 MRPL17Q9NRX2 175 aaKnown RBP21.55■■□□□ 1.04
SNCA-203ENST00000394986 STK39Q9UEW8 545 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 ANK1P16157 1881 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 LILRB3O75022 631 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 DLATP10515 647 aaKnown RBP21.55■■□□□ 1.04
SNCA-203ENST00000394986 MCM4P33991 863 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 DSG1Q02413 1049 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 PSMD6Q15008 389 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 DUSP6Q16828 381 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 KLHL10Q6JEL2 608 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 PRSS55Q6UWB4 352 aaPredicted RBP21.55■■□□□ 1.04
SNCA-203ENST00000394986 EP400NLQ6ZTU2 488 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 C1orf127Q8N9H9 656 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 VN1R2Q8NFZ6 395 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 PPP2R3CQ969Q6 453 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 TTPALQ9BTX7 342 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 IRAK3Q9Y616 596 aa21.55■■□□□ 1.04
SNCA-203ENST00000394986 ANO9A1A5B4 782 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 RPL17P18621 184 aaKnown RBP21.54■■□□□ 1.04
SNCA-203ENST00000394986 TKTP29401 623 aaKnown RBP21.54■■□□□ 1.04
SNCA-203ENST00000394986 BMS1Q14692 1282 aaKnown RBP21.54■■□□□ 1.04
SNCA-203ENST00000394986 NFIL3Q16649 462 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 ANKRD40Q6AI12 368 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 CENPPQ6IPU0 288 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 LLGL2Q6P1M3 1020 aa21.54■■□□□ 1.04
SNCA-203ENST00000394986 NT5DC4Q86YG4 428 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms