RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 GPAT2Q6NUI2 795 aa16.96■□□□□ 0.31
SMARCD1-202ENST00000394963 TMEM192Q8IY95 271 aa16.96■□□□□ 0.31
SMARCD1-202ENST00000394963 CASKIN2Q8WXE0 1202 aa16.96■□□□□ 0.31
SMARCD1-202ENST00000394963 FAM167AQ96KS9 214 aa16.96■□□□□ 0.31
SMARCD1-202ENST00000394963 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.31
SMARCD1-202ENST00000394963 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 KRT1P04264 644 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 TMEM253P0C7T8 217 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 RARBP10826 455 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 AKAP5P24588 427 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 PHKA2P46019 1235 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 OAZ1P54368 228 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 RWDD2BP57060 319 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 ATP13A4Q4VNC1 1196 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 TWF2Q6IBS0 349 aaKnown RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 SLC39A4Q6P5W5 647 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 CCDC137Q6PK04 289 aaKnown RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 GINM1Q9NU53 330 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 MTRF1LQ9UGC7 380 aaKnown RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 PIN4Q9Y237 131 aaKnown RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 NUB1Q9Y5A7 615 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 ASB14A6NK59 587 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 BTBD19C9JJ37 291 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 WNT7BP56706 349 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 NNTQ13423 1086 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 CCDC38Q502W7 563 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 PAN2Q504Q3 1202 aaKnown RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 INPP5FQ9Y2H2 1132 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 STAM2O75886 525 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 SCARA3Q6AZY7 606 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 C10orf88Q9H8K7 445 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 COG5Q9UP83 839 aa16.95■□□□□ 0.3
SMARCD1-202ENST00000394963 CXCL11O14625 94 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 ADCY3O60266 1144 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 MYZAPP0CAP1 466 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 POLR2BP30876 1174 aaKnown RBP16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 MARSP56192 900 aaKnown RBP16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 BPIFB4P59827 614 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 CUL2Q13617 745 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 ALG3Q92685 438 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 AP5M1Q9H0R1 490 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 FBXL5Q9UKA1 691 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 MAST2Q6P0Q8 1798 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 M0QYV0 167 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 SLC26A4O43511 780 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 TOM1L1O75674 476 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 ZSCAN26Q16670 478 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 PPP6R3Q5H9R7 873 aaPredicted RBP16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 KIAA0319LQ8IZA0 1049 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 ANKRD42Q8N9B4 389 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 KCNG1Q9UIX4 513 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 PPP2R3BQ9Y5P8 575 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 RPTORQ8N122 1335 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 SYNGAP1Q96PV0 1343 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 GH1P01241 217 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 MUTP22033 750 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 GABPB1Q06547 395 aaPredicted RBP16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 ASTE1Q2TB18 679 aaPredicted RBP16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 IER5Q5VY09 327 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 REPS2Q8NFH8 660 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 ATP8B4Q8TF62 1192 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 FMO2Q99518 471 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
SMARCD1-202ENST00000394963 SPDYE5A6NIY4 337 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 PYGMP11217 842 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 CETPP11597 493 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 NCKAP1LP55160 1127 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 CDR2Q01850 454 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 MXD4Q14582 209 aaPredicted RBP16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 NT5DC3Q86UY8 548 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 TSEN2Q8NCE0 465 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 MAK16Q9BXY0 300 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 KIAA1586Q9HCI6 787 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 DMAC2Q9NW81 257 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 NOVA2Q9UNW9 492 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 PCDHB2Q9Y5E7 798 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 ZRANB2O95218 330 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 ADORA2BP29275 332 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 PSMC1P62191 440 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 CELF3Q5SZQ8 465 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 MSANTD4Q8NCY6 345 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 RDM1Q8NG50 284 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 LRRN4Q8WUT4 740 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 ARL8AQ96BM9 186 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 RAB17Q9H0T7 212 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 HPCAL4Q9UM19 191 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 TTLL3Q9Y4R7 772 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 UBE4BO95155 1302 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 SGK1O00141 431 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 PSMA2P25787 234 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 HOXA7P31268 230 aaPredicted RBP16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 ZNF516Q92618 1163 aa16.93■□□□□ 0.3
SMARCD1-202ENST00000394963 GTPBP10A4D1E9 387 aaKnown RBP16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 NDUFAB1O14561 156 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 HBP1O60381 514 aa16.92■□□□□ 0.3
SMARCD1-202ENST00000394963 NPTXRO95502 500 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms