RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 PI15O43692 258 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 NARSO43776 548 aaKnown RBP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 USO1O60763 962 aaKnown RBP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 TOM1L1O75674 476 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 PLS3P13797 630 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 DDX6P26196 483 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 TXKP42681 527 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 SLC12A3P55017 1021 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 CYP4A11Q02928 519 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 RILPL1Q5EBL4 403 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 GPR152Q8TDT2 470 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 TMEM174Q8WUU8 243 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 LOXL4Q96JB6 756 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 STRA6Q9BX79 667 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 KIF3AQ9Y496 699 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 XPOTO43592 962 aaKnown RBP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 MARCH6O60337 910 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 MOSPD3O75425 235 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 ATP2B1P20020 1258 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 NPTX2P47972 431 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 TOB1P50616 345 aaPredicted RBP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 PUM1Q14671 1186 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 SLC44A4Q53GD3 710 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 RINT1Q6NUQ1 792 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 TMC8Q8IU68 726 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 ADSSL1Q8N142 457 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 FGF13Q92913 245 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 C8orf76Q96K31 380 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 BCO2Q9BYV7 579 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 CDH22Q9UJ99 828 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 TTC26A0AVF1 554 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 ANO9A1A5B4 782 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 LRRIQ4A6NIV6 560 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 MCM2P49736 904 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 STK3Q13188 491 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 FAM171A1Q5VUB5 890 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 EEF1DP3Q658K8 133 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 LIMS2Q7Z4I7 341 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 TMEM161BQ8NDZ6 487 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZNF668Q96K58 619 aaPredicted RBP6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 CCDC43Q96MW1 224 aaKnown RBP6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 ASB16Q96NS5 453 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 RTKNQ9BST9 563 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 FBXL21Q9UKT6 434 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 DSEQ9UL01 958 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PRG3Q9Y2Y8 225 aaPredicted RBP6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 INSL5Q9Y5Q6 135 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 RFPL2O75678 378 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 CLTAP09496 248 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 AKAP5P24588 427 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 GBP2P32456 591 aaPredicted RBP6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 ROR1Q01973 937 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PTGDRQ13258 359 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 DMP1Q13316 513 aaPredicted RBP6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PABPC1LQ4VXU2 614 aaKnown RBP6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 DGKKQ5KSL6 1271 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 CNNM4Q6P4Q7 775 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 DDX12PQ92771 950 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 GBP3Q9H0R5 595 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PARP2Q9UGN5 583 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 TTLL13PA6NNM8 815 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 H0Y858 1186 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 K7ERI5 159 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PODXLO00592 558 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 CHADO15335 359 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 ID4P47928 161 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PLCB2Q00722 1185 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PPP2R5DQ14738 602 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 VARS2Q5ST30 1063 aaKnown RBP6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZNF280DQ6N043 979 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 KANK3Q6NY19 840 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PARM1Q6UWI2 310 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 WDR5BQ86VZ2 330 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 MFSD6LQ8IWD5 586 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 PIGOQ8TEQ8 1089 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 RUBCNQ92622 972 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 FGF14Q92915 247 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 ACAP3Q96P50 834 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 LRWD1Q9UFC0 647 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 DNM3Q9UQ16 869 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 C2CD2Q9Y426 696 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 HES2Q9Y543 173 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 DOCK6Q96HP0 2047 aa6.82□□□□□ -1.32
SMARCAD1-203ENST00000394961 GPR17Q13304 367 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 LRRC32Q14392 662 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 NOLC1Q14978 699 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 LAIR1Q6GTX8 287 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 PRSS55Q6UWB4 352 aaPredicted RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZNF852Q6ZMS4 543 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 SKAP1Q86WV1 359 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 CELF5Q8N6W0 485 aaKnown RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 C3orf58Q8NDZ4 430 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 PNMA5Q96PV4 448 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 SH2D3AQ9BRG2 576 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 APOL5Q9BWW9 433 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 ASB7Q9H672 318 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 KIF9Q9HAQ2 790 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 PIDD1Q9HB75 910 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 GPRC5CQ9NQ84 441 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms