RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PTENP60484 403 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 EPHA7Q15375 998 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 Q4G0T1 1027 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 PHLDB3Q6NSJ2 640 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 TRABDQ9H4I3 376 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 CYP4F11Q9HBI6 524 aa14.04□□□□□ -0.16
NFKB1-202ENST00000394820 SAE1Q9UBE0 346 aaPredicted RBP14.04□□□□□ -0.16
NFKB1-202ENST00000394820 PPARGC1AQ9UBK2 798 aaKnown RBP14.04□□□□□ -0.16
NFKB1-202ENST00000394820 PITPNM2Q9BZ72 1349 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 FAM187AA6NFU0 413 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 MAPK13O15264 365 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 ZBED4O75132 1171 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 ETS1P14921 441 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 ARSEP51690 589 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 ATP13A4Q4VNC1 1196 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 GMCL1P1Q8NEA9 526 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 ZSWIM2Q8NEG5 633 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 CCDC110Q8TBZ0 833 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 CFAP36Q96G28 342 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 CEP170P1Q96L14 293 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 CARD9Q9H257 536 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 HERC5Q9UII4 1024 aaKnown RBP14.03□□□□□ -0.16
NFKB1-202ENST00000394820 TMX2Q9Y320 296 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 TGFB1I1O43294 461 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 LIG4P49917 911 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 ARHGEF16Q5VV41 709 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 SPOPLQ6IQ16 392 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 TMEM154Q6P9G4 183 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 HAUS6Q7Z4H7 955 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 EXOC3L1Q86VI1 746 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 PYROXD1Q8WU10 500 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 FAM151AQ8WW52 585 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 PPP1R36Q96LQ0 422 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 TAAR1Q96RJ0 339 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 ZSWIM1Q9BR11 485 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 TRIM4Q9C037 500 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 SLC4A7Q9Y6M7 1214 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 SYNJ2BP-COX16A0A087WUM0 186 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 KIAA0391O15091 583 aaKnown RBP14.03□□□□□ -0.16
NFKB1-202ENST00000394820 MTMR2Q13614 643 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 DHX34Q14147 1143 aaKnown RBP14.03□□□□□ -0.16
NFKB1-202ENST00000394820 ASTE1Q2TB18 679 aaPredicted RBP14.03□□□□□ -0.16
NFKB1-202ENST00000394820 STYK1Q6J9G0 422 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 LRRN4Q8WUT4 740 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 SYN2Q92777 582 aaPredicted RBP14.03□□□□□ -0.16
NFKB1-202ENST00000394820 KMT5AQ9NQR1 393 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 COX16Q9P0S2 106 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 COG5Q9UP83 839 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 NAALADL1Q9UQQ1 740 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 SMCHD1A6NHR9 2005 aa14.03□□□□□ -0.16
NFKB1-202ENST00000394820 CYP3A7-CYP3A51PA0A087WV96 503 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 DENND3A2RUS2 1198 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 CYP3A7P24462 503 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 MTMR1Q13613 665 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 AUHQ13825 339 aaKnown RBP14.02□□□□□ -0.16
NFKB1-202ENST00000394820 SPARCL1Q14515 664 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 MTERF2Q49AM1 385 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 BRDTQ58F21 947 aaPredicted RBP14.02□□□□□ -0.16
NFKB1-202ENST00000394820 SLC25A41Q8N5S1 370 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 DDX50Q9BQ39 737 aaKnown RBP14.02□□□□□ -0.16
NFKB1-202ENST00000394820 TXLNGQ9NUQ3 528 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 SLC12A6Q9UHW9 1150 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 WNK3Q9BYP7 1800 aa14.02□□□□□ -0.16
NFKB1-202ENST00000394820 MIF4GDA9UHW6 222 aaKnown RBP14.02□□□□□ -0.17
NFKB1-202ENST00000394820 TBX3O15119 743 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 GAP43P17677 238 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 RRM1P23921 792 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 CTCFP49711 727 aaPredicted RBP14.02□□□□□ -0.17
NFKB1-202ENST00000394820 KCNT1Q5JUK3 1230 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 CDR2LQ86X02 465 aaPredicted RBP14.02□□□□□ -0.17
NFKB1-202ENST00000394820 RMDN3Q96TC7 470 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 MAK16Q9BXY0 300 aaKnown RBP14.02□□□□□ -0.17
NFKB1-202ENST00000394820 LAMB1P07942 1786 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 TLR3O15455 904 aaKnown RBP14.02□□□□□ -0.17
NFKB1-202ENST00000394820 EGFRP00533 1210 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 SERPINB6P35237 376 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 ORC1Q13415 861 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 TTC27Q6P3X3 843 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 CROCCP2Q86T23 111 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.02□□□□□ -0.17
NFKB1-202ENST00000394820 RMDN2Q96LZ7 410 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 ACCSQ96QU6 501 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 HSPBP1Q9NZL4 362 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 C15orf41Q9Y2V0 281 aa14.02□□□□□ -0.17
NFKB1-202ENST00000394820 ASTN2O75129 1339 aaPredicted RBP14.01□□□□□ -0.17
NFKB1-202ENST00000394820 AP1G2O75843 785 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 ITGB5P18084 799 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 CCNHP51946 323 aaPredicted RBP14.01□□□□□ -0.17
NFKB1-202ENST00000394820 CDR2Q01850 454 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 HYIQ5T013 277 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 TMCO4Q5TGY1 634 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 ARMC3Q5W041 872 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 CCT6BQ92526 530 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 ARMCX1Q9P291 453 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 SEPT9Q9UHD8 586 aaPredicted RBP14.01□□□□□ -0.17
NFKB1-202ENST00000394820 SNX3O60493 162 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 RASSF9O75901 435 aa14.01□□□□□ -0.17
NFKB1-202ENST00000394820 MT-ND3P03897 115 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms