RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 C1orf220Q5T0J3 134 aa20.9■□□□□ 0.94
PSEN1-203ENST00000394157 CREBRFQ8IUR6 639 aa20.9■□□□□ 0.94
PSEN1-203ENST00000394157 COLGALT2Q8IYK4 626 aa20.9■□□□□ 0.94
PSEN1-203ENST00000394157 POP1Q99575 1024 aaKnown RBP20.9■□□□□ 0.94
PSEN1-203ENST00000394157 TUBGCP2Q9BSJ2 902 aa20.9■□□□□ 0.94
PSEN1-203ENST00000394157 TMEM8AQ9HCN3 771 aa20.9■□□□□ 0.94
PSEN1-203ENST00000394157 AAASQ9NRG9 546 aa20.9■□□□□ 0.94
PSEN1-203ENST00000394157 DPP3Q9NY33 737 aa20.9■□□□□ 0.94
PSEN1-203ENST00000394157 LIMA1Q9UHB6 759 aaKnown RBP20.9■□□□□ 0.94
PSEN1-203ENST00000394157 RWDD3Q9Y3V2 267 aa20.9■□□□□ 0.94
PSEN1-203ENST00000394157 PTPRJQ12913 1337 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 P4HA2O15460 535 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 AFPP02771 609 aaKnown RBP20.89■□□□□ 0.93
PSEN1-203ENST00000394157 TRIM49P0CI25 452 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 TRIM49CP0CI26 452 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 LAG3P18627 525 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 CETN1Q12798 172 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 ZACNQ401N2 412 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 KRT39Q6A163 491 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 C15orf39Q6ZRI6 1047 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 TRAPPC11Q7Z392 1133 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 OR5B17Q8NGF7 314 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 CLP1Q92989 425 aaKnown RBP20.89■□□□□ 0.93
PSEN1-203ENST00000394157 C18orf25Q96B23 403 aaPredicted RBP20.89■□□□□ 0.93
PSEN1-203ENST00000394157 MTMR12Q9C0I1 747 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 CWH43Q9H720 699 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 NRDE2Q9H7Z3 1164 aa20.89■□□□□ 0.93
PSEN1-203ENST00000394157 R3HCC1Q9Y3T6 440 aaKnown RBP20.89■□□□□ 0.93
PSEN1-203ENST00000394157 TULP1O00294 542 aaPredicted RBP20.88■□□□□ 0.93
PSEN1-203ENST00000394157 DDHD2O94830 711 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 C4BPAP04003 597 aaKnown RBP20.88■□□□□ 0.93
PSEN1-203ENST00000394157 ALDH2P05091 517 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 PPP3CAQ08209 521 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 KCNH2Q12809 1159 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 KRT31Q15323 416 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 HSP90AA4PQ58FG1 418 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 SV2AQ7L0J3 742 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 ZNF280BQ86YH2 543 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 ZNF516Q92618 1163 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 TUBGCP4Q9UGJ1 667 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 MSRAQ9UJ68 235 aa20.88■□□□□ 0.93
PSEN1-203ENST00000394157 MRPL42Q9Y6G3 142 aaKnown RBP20.88■□□□□ 0.93
PSEN1-203ENST00000394157 ANO9A1A5B4 782 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 PNPLA4P41247 253 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 GCLMP48507 274 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 FMO5P49326 533 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 ALDH7A1P49419 539 aaKnown RBP20.87■□□□□ 0.93
PSEN1-203ENST00000394157 MXI1P50539 228 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 RBP5P82980 135 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 SMAD3P84022 425 aaKnown RBP20.87■□□□□ 0.93
PSEN1-203ENST00000394157 SOX4Q06945 474 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-203ENST00000394157 BIRC3Q13489 604 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 UPP1Q16831 310 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 VWA3BQ502W6 1294 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 LMBRD2Q68DH5 695 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-203ENST00000394157 FAM109BQ6ICB4 259 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-203ENST00000394157 DCLRE1AQ6PJP8 1040 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 C1orf127Q8N9H9 656 aa20.87■□□□□ 0.93
PSEN1-203ENST00000394157 GTPBP10A4D1E9 387 aaKnown RBP20.86■□□□□ 0.93
PSEN1-203ENST00000394157 TMEM189-UBE2V1I3L0A0 370 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 PIRO00625 290 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 ZC3H11AO75152 810 aaKnown RBP eCLIP20.86■□□□□ 0.93
PSEN1-203ENST00000394157 PHACTR2O75167 634 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 RABGGTBP53611 331 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 LRIT3Q3SXY7 679 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 SPOUT1Q5T280 376 aaKnown RBP20.86■□□□□ 0.93
PSEN1-203ENST00000394157 TDRD10Q5VZ19 366 aaKnown RBP20.86■□□□□ 0.93
PSEN1-203ENST00000394157 C9orf57Q5W0N0 161 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 GAS2L3Q86XJ1 694 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 LRRC52Q8N7C0 313 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 RNF214Q8ND24 703 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 ZNF560Q96MR9 790 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 ZNF558Q96NG5 402 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 SAMD11Q96NU1 681 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 COLEC11Q9BWP8 271 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 NDST4Q9H3R1 872 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 FAN1Q9Y2M0 1017 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 COQ4Q9Y3A0 265 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 PCDHB12Q9Y5F1 795 aa20.86■□□□□ 0.93
PSEN1-203ENST00000394157 CASTOR2A6NHX0 329 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 GRXCR1A8MXD5 290 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 PODXLO00592 558 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 ITGB3P05106 788 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 GALTP07902 379 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 ATP1A3P13637 1013 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 ATICP31939 592 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 PPM1AP35813 382 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 BCAR1P56945 870 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 MYO1EQ12965 1108 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 TRPC3Q13507 836 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 FILIP1LQ4L180 1135 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 MIIPQ5JXC2 388 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 KCNT2Q6UVM3 1135 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 FBXL13Q8NEE6 735 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 CXorf38Q8TB03 319 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 TAF4BQ92750 862 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 PBX4Q9BYU1 374 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 DNAJB4Q9UDY4 337 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 STK39Q9UEW8 545 aa20.85■□□□□ 0.93
PSEN1-203ENST00000394157 LINC01553A4QN01 128 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms