RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 SEMA4AQ9H3S1 761 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 MTRRQ9UBK8 725 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 PCDHA7Q9UN72 937 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 MTF2Q9Y483 593 aaPredicted RBP20.41■□□□□ 0.86
SNCB-202ENST00000393693 CDY1Q9Y6F8 540 aa20.41■□□□□ 0.86
SNCB-202ENST00000393693 LETM1O95202 739 aaPredicted RBP20.4■□□□□ 0.86
SNCB-202ENST00000393693 TKTP29401 623 aaKnown RBP20.4■□□□□ 0.86
SNCB-202ENST00000393693 BRCC3P46736 316 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 DCAF4L1Q3SXM0 396 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 SLC44A4Q53GD3 710 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 ATF7IP2Q5U623 682 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 PDXDC1Q6P996 788 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 WDR87Q6ZQQ6 2873 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 MAML2Q8IZL2 1156 aaPredicted RBP20.4■□□□□ 0.86
SNCB-202ENST00000393693 C3orf58Q8NDZ4 430 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 ING5Q8WYH8 240 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 GZF1Q9H116 711 aaPredicted RBP20.4■□□□□ 0.86
SNCB-202ENST00000393693 PCDHB6Q9Y5E3 794 aa20.4■□□□□ 0.86
SNCB-202ENST00000393693 VWA8A3KMH1 1905 aa20.39■□□□□ 0.86
SNCB-202ENST00000393693 CD72P21854 359 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 ORC2Q13416 577 aaPredicted RBP20.39■□□□□ 0.85
SNCB-202ENST00000393693 PPP2R5AQ15172 486 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 UVSSAQ2YD98 709 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 PABPC1LQ4VXU2 614 aaKnown RBP20.39■□□□□ 0.85
SNCB-202ENST00000393693 POTEHQ6S545 545 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 MTSS1LQ765P7 747 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 ERMP1Q7Z2K6 904 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 NPAS3Q8IXF0 933 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 KIAA2013Q8IYS2 634 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 CEP120Q8N960 986 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 KRI1Q8N9T8 703 aaKnown RBP20.39■□□□□ 0.85
SNCB-202ENST00000393693 DDX27Q96GQ7 796 aaKnown RBP20.39■□□□□ 0.85
SNCB-202ENST00000393693 SHDQ96IW2 340 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 IFT74Q96LB3 600 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 BHMT2Q9H2M3 363 aa20.39■□□□□ 0.85
SNCB-202ENST00000393693 KANSL1LA0AUZ9 987 aa20.38■□□□□ 0.85
SNCB-202ENST00000393693 TMEM189-UBE2V1I3L0A0 370 aa20.38■□□□□ 0.85
SNCB-202ENST00000393693 CCT6AP40227 531 aaKnown RBP20.38■□□□□ 0.85
SNCB-202ENST00000393693 SOX4Q06945 474 aaPredicted RBP20.38■□□□□ 0.85
SNCB-202ENST00000393693 MLF2Q15773 248 aaPredicted RBP20.38■□□□□ 0.85
SNCB-202ENST00000393693 UPP1Q16831 310 aa20.38■□□□□ 0.85
SNCB-202ENST00000393693 CCDC183Q5T5S1 534 aa20.38■□□□□ 0.85
SNCB-202ENST00000393693 DCLK2Q8N568 766 aa20.38■□□□□ 0.85
SNCB-202ENST00000393693 RMDN1Q96DB5 314 aa20.38■□□□□ 0.85
SNCB-202ENST00000393693 MCRS1Q96EZ8 462 aa20.38■□□□□ 0.85
SNCB-202ENST00000393693 DDX23Q9BUQ8 820 aaKnown RBP20.38■□□□□ 0.85
SNCB-202ENST00000393693 DDX19AQ9NUU7 478 aaKnown RBP20.38■□□□□ 0.85
SNCB-202ENST00000393693 ZNF292O60281 2723 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 SMIM28A0A1B0GU29 152 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 POU2F2P09086 479 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 MARCKSP29966 332 aaPredicted RBP20.37■□□□□ 0.85
SNCB-202ENST00000393693 EFNA5P52803 228 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 OSTNP61366 133 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 UBXN2BQ14CS0 331 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 SLC5A9Q2M3M2 681 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 C4orf32Q8N8J7 132 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 FSIP1Q8NA03 581 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 PLA2G2FQ9BZM2 168 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 KIAA1024Q9UPX6 916 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 MRPS23Q9Y3D9 190 aaKnown RBP20.37■□□□□ 0.85
SNCB-202ENST00000393693 BACE2Q9Y5Z0 518 aa20.37■□□□□ 0.85
SNCB-202ENST00000393693 EP300Q09472 2414 aaPredicted RBP20.37■□□□□ 0.85
SNCB-202ENST00000393693 FAM170BA6NMN3 283 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 K7ERI5 159 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 LAD1O00515 517 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 RHOP08100 348 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 CMA1P23946 247 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 PRKCQQ04759 706 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 GSE1Q14687 1217 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 ZC3H14Q6PJT7 736 aaKnown RBP20.36■□□□□ 0.85
SNCB-202ENST00000393693 KIFAP3Q92845 792 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 UROC1Q96N76 676 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 HINFPQ9BQA5 517 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 CDT1Q9H211 546 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 SPATA6Q9NWH7 488 aaPredicted RBP20.36■□□□□ 0.85
SNCB-202ENST00000393693 TMEM63CQ9P1W3 806 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 KCNH3Q9ULD8 1083 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 TNFSF13BQ9Y275 285 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 SRPRBQ9Y5M8 271 aaKnown RBP20.36■□□□□ 0.85
SNCB-202ENST00000393693 NOTCH4Q99466 2003 aa20.36■□□□□ 0.85
SNCB-202ENST00000393693 CCDC169A6NNP5 214 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 MUTP22033 750 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 PEX3P56589 373 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 ROR1Q01973 937 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 HAUS3Q68CZ6 603 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 ANKS3Q6ZW76 656 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 ZMAT2Q96NC0 199 aaKnown RBP20.35■□□□□ 0.85
SNCB-202ENST00000393693 ACO2Q99798 780 aaKnown RBP20.35■□□□□ 0.85
SNCB-202ENST00000393693 BCO2Q9BYV7 579 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 LTB4R2Q9NPC1 389 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 LRWD1Q9UFC0 647 aa20.35■□□□□ 0.85
SNCB-202ENST00000393693 E9PMD0 336 aa20.34■□□□□ 0.85
SNCB-202ENST00000393693 TRAPPC3O43617 180 aa20.34■□□□□ 0.85
SNCB-202ENST00000393693 CEBPBP17676 345 aa20.34■□□□□ 0.85
SNCB-202ENST00000393693 GRM5P41594 1212 aa20.34■□□□□ 0.85
SNCB-202ENST00000393693 NPTX2P47972 431 aa20.34■□□□□ 0.85
SNCB-202ENST00000393693 FXR2P51116 673 aaKnown RBP eCLIP20.34■□□□□ 0.85
SNCB-202ENST00000393693 ARPP19P56211 112 aa20.34■□□□□ 0.85
SNCB-202ENST00000393693 ATP2C1P98194 919 aaPredicted RBP20.34■□□□□ 0.85
SNCB-202ENST00000393693 PFKPQ01813 784 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms