RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 KLHL41O60662 606 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 FAM58BPP0C7Q3 252 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CCDC130P13994 396 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 JAK1P23458 1154 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 KLRC1P26715 233 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PMLP29590 882 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 HIBADHP31937 336 aaKnown RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 NEK3P51956 506 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 NR1H3Q13133 447 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PPP2R5BQ15173 497 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MDH1BQ5I0G3 518 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CEP78Q5JTW2 689 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 UNC13DQ70J99 1090 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CLVS1Q8IUQ0 354 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-201ENST00000393077 SLC25A41Q8N5S1 370 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 FBXO25Q8TCJ0 367 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PYROXD1Q8WU10 500 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 OTUD5Q96G74 571 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 ZFYVE19Q96K21 471 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 GCNAQ96QF7 691 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 CYP4F11Q9HBI6 524 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 MCM9Q9NXL9 1143 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 GIT1Q9Y2X7 761 aa8.05□□□□□ -1.12
VTI1A-201ENST00000393077 PXDNQ92626 1479 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 C1orf232A0A0U1RR37 186 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 SNTNA6NMZ2 147 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TBKBP1A7MCY6 615 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 DEAF1O75398 565 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 SRGAP2CP0DJJ0 459 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 SRGAP2BP0DMP2 458 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 UQCRBP14927 111 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 CCNE1P24864 410 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 PBX1P40424 430 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 KLK7P49862 253 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TPD52P55327 224 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ITPRIPL1Q6GPH6 555 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 KLHDC10Q6PID8 442 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 NELFCDQ8IXH7 590 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TERB1Q8NA31 727 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 DIS3LQ8TF46 1054 aaKnown RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 GDPD5Q8WTR4 605 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ANKS1AQ92625 1134 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 SERPINB12Q96P63 405 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 HAPLN3Q96S86 360 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 OSBPL6Q9BZF3 934 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 FOXP1Q9H334 677 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TPK1Q9H3S4 243 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 EHD1Q9H4M9 534 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 VAT1LQ9HCJ6 419 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 CAB39Q9Y376 341 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 FAM32AQ9Y421 112 aaKnown RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 C15orf38-AP3S2A0A0A6YYH1 394 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ATF2P15336 505 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 PTK2Q05397 1052 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 LRRC63Q05C16 580 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 CHRNDQ07001 517 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 EIF2B5Q13144 721 aaKnown RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 PTGDRQ13258 359 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 DHX34Q14147 1143 aaKnown RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 DSTYKQ6XUX3 929 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ARPINQ7Z6K5 226 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 CTAGE3PQ8IX95 158 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ITPKCQ96DU7 683 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 NRBF2Q96F24 287 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TMEM87BQ96K49 555 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ZC3H12CQ9C0D7 883 aaKnown RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 MEGF6O75095 1541 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 MROH5Q6ZUA9 1318 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 C3P01024 1663 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TIMM44O43615 452 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 UFL1O94874 794 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 MFN2O95140 757 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 GJB6O95452 261 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 FYNP06241 537 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 EEF1B2P24534 225 aaKnown RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TCF7P36402 384 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 BCAP31P51572 246 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 CTDSPL2Q05D32 466 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 PICALMQ13492 652 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ALKBH5Q6P6C2 394 aaKnown RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 STOX1Q6ZVD7 989 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 CABP7Q86V35 215 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 CATSPER3Q86XQ3 398 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 ZBED8Q8IZ13 594 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TBC1D16Q8TBP0 767 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 EME1Q96AY2 570 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 TLCD1Q96CP7 247 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 CCDC134Q9H6E4 229 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 PCDH12Q9NPG4 1184 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 FBXO2Q9UK22 296 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-201ENST00000393077 WASF2Q9Y6W5 498 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 KIF20BQ96Q89 1820 aa8.04□□□□□ -1.12
VTI1A-201ENST00000393077 JCADQ9P266 1359 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ARPC4-TTLL3A0A0A6YYG9 625 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 SH3PXD2BA1X283 911 aa8.03□□□□□ -1.12
VTI1A-201ENST00000393077 ZBTB11O95625 1053 aaPredicted RBP8.03□□□□□ -1.12
VTI1A-201ENST00000393077 FGAP02671 866 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms