RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ZSWIM8A7E2V4 1837 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 UPP2O95045 317 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 ZNF865P0CJ78 1059 aaPredicted RBP20.31■□□□□ 0.84
CCDC50-202ENST00000392456 ALCAMQ13740 583 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 TCERG1LQ5VWI1 586 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 OLFML2BQ68BL8 750 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 PRPF31Q8WWY3 499 aaKnown RBP20.31■□□□□ 0.84
CCDC50-202ENST00000392456 EMID1Q96A84 441 aaPredicted RBP20.31■□□□□ 0.84
CCDC50-202ENST00000392456 IFT74Q96LB3 600 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 GOLGA8IPA6NC78 632 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 GOLGA8JA6NMD2 632 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 EXOC3O60645 756 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 EDN1P05305 212 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 PSMC2P35998 433 aaKnown RBP20.3■□□□□ 0.84
CCDC50-202ENST00000392456 IGBP1P78318 339 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 TNFAIP2Q03169 654 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 HIBCHQ6NVY1 386 aaPredicted RBP20.3■□□□□ 0.84
CCDC50-202ENST00000392456 TEX9Q8N6V9 391 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 FAM167AQ96KS9 214 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 CAPN11Q9UMQ6 739 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 LRRIQ4A6NIV6 560 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 SLC16A3O15427 465 aaKnown RBP20.3■□□□□ 0.84
CCDC50-202ENST00000392456 DYNC1LI2O43237 492 aaPredicted RBP20.3■□□□□ 0.84
CCDC50-202ENST00000392456 ZMYND10O75800 440 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 RFC5P40937 340 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 IQSEC1Q6DN90 963 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 CNGA4Q8IV77 575 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 SH2D3CQ8N5H7 860 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 FAM167BQ9BTA0 163 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 ERAP1Q9NZ08 941 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 HSPBP1Q9NZL4 362 aa20.3■□□□□ 0.84
CCDC50-202ENST00000392456 LRRD1A4D1F6 860 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 GHRP10912 638 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 XRCC5P13010 732 aaKnown RBP20.29■□□□□ 0.84
CCDC50-202ENST00000392456 MXRA7P84157 204 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 CAPSQ13938 189 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 SLC9A9Q8IVB4 645 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 EHBP1Q8NDI1 1231 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 OR6J1Q8NGC5 347 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 AGAP11Q8TF27 550 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 P3H4Q92791 437 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 SLC35B4Q969S0 331 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 CAPNS2Q96L46 248 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 CHP1Q99653 195 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 HDAC6Q9UBN7 1215 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 GABRQQ9UN88 632 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 LUC7L2Q9Y383 392 aaKnown RBP20.29■□□□□ 0.84
CCDC50-202ENST00000392456 ZNF236Q9UL36 1845 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 NOL4O94818 638 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 TRIM49P0CI25 452 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 TRIM49CP0CI26 452 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 INSRRP14616 1297 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 DLG4P78352 724 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 DEFB115Q30KQ5 88 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 WDR59Q6PJI9 974 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 PHC3Q8NDX5 983 aa20.29■□□□□ 0.84
CCDC50-202ENST00000392456 IGKV6-21A0A0C4DH24 114 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 TTLL13PA6NNM8 815 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 IGHA2P01877 340 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 MMP3P08254 477 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 PSMC4P43686 418 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 HTRA3P83110 453 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 PLEKHO2Q8TD55 490 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 GNEQ9Y223 722 aaKnown RBP20.28■□□□□ 0.84
CCDC50-202ENST00000392456 FRMD4BQ9Y2L6 1034 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 TMEM98Q9Y2Y6 226 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 ACTN1P12814 892 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 SLC9A1P19634 815 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 RGS2P41220 211 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 KCNN1Q92952 543 aa20.28■□□□□ 0.84
CCDC50-202ENST00000392456 ABLIM1O14639 778 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 HBP1O60381 514 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 SRGAP2CP0DJJ0 459 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 NAMPTP43490 491 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 SLC26A2P50443 739 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 CLCN3P51790 818 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 NOGQ13253 232 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 TRIM14Q14142 442 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 ALS2CLQ60I27 953 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 DPY19L2P1Q6NXN4 242 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 SND1Q7KZF4 910 aaKnown RBP eCLIP20.27■□□□□ 0.84
CCDC50-202ENST00000392456 CBWD2Q8IUF1 395 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 SLC17A8Q8NDX2 589 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 MAIP1Q8WWC4 291 aa20.27■□□□□ 0.84
CCDC50-202ENST00000392456 METTL14Q9HCE5 456 aaKnown RBP20.27■□□□□ 0.84
CCDC50-202ENST00000392456 H3BRB1 525 aa20.27■□□□□ 0.83
CCDC50-202ENST00000392456 AFPP02771 609 aaKnown RBP20.27■□□□□ 0.83
CCDC50-202ENST00000392456 MDH1P40925 334 aaKnown RBP20.27■□□□□ 0.83
CCDC50-202ENST00000392456 METTL13Q8N6R0 699 aa20.27■□□□□ 0.83
CCDC50-202ENST00000392456 HVCN1Q96D96 273 aa20.27■□□□□ 0.83
CCDC50-202ENST00000392456 DNAJC7Q99615 494 aa20.27■□□□□ 0.83
CCDC50-202ENST00000392456 APBA2Q99767 749 aa20.27■□□□□ 0.83
CCDC50-202ENST00000392456 MKNK1Q9BUB5 465 aa20.27■□□□□ 0.83
CCDC50-202ENST00000392456 TUT1Q9H6E5 874 aaKnown RBP20.27■□□□□ 0.83
CCDC50-202ENST00000392456 EVPLQ92817 2033 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 E7EVH7 732 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 HNRNPDLO14979 420 aaKnown RBP20.26■□□□□ 0.83
CCDC50-202ENST00000392456 E2F6O75461 281 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 ADRB2P07550 413 aa20.26■□□□□ 0.83
CCDC50-202ENST00000392456 ALADP13716 330 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms