RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 POLIQ9UNA4 740 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 STK25O00506 426 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 ACADLP28330 430 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 ZNF438Q7Z4V0 828 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 BEST2Q8NFU1 509 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 ATP8B4Q8TF62 1192 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 SERHL2Q9H4I8 314 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 SERHLQ9NQF3 203 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 ANO9A1A5B4 782 aa15.46■□□□□ 0.06
CCDC50-201ENST00000392455 USP17L3A6NCW0 530 aa15.46■□□□□ 0.06
CCDC50-201ENST00000392455 USP17L4A6NCW7 530 aa15.46■□□□□ 0.06
CCDC50-201ENST00000392455 RABGAP1LQ5R372 815 aa15.46■□□□□ 0.06
CCDC50-201ENST00000392455 USP17L1Q7RTZ2 530 aa15.46■□□□□ 0.06
CCDC50-201ENST00000392455 VTI1BQ9UEU0 232 aa15.46■□□□□ 0.06
CCDC50-201ENST00000392455 G3BP2Q9UN86 482 aaKnown RBP15.46■□□□□ 0.06
CCDC50-201ENST00000392455 SYNMO15061 1565 aa15.46■□□□□ 0.06
CCDC50-201ENST00000392455 GRK2P25098 689 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 IL12RB1P42701 662 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 EMILIN3Q9NT22 766 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 STX11O75558 287 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 IL6STP40189 918 aaPredicted RBP15.45■□□□□ 0.06
CCDC50-201ENST00000392455 MAGED4Q96JG8 741 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 CEP44Q9C0F1 390 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 CDYLQ9Y232 598 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 RASA1P20936 1047 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 TRPM8Q7Z2W7 1104 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 MAP4K1Q92918 833 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 ZFATQ9P243 1243 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 FGGP02679 453 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 CYBBP04839 570 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 GPC5P78333 572 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 SLC7A5Q01650 507 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 COX10Q12887 443 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 CCT7Q99832 543 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 PHKA2P46019 1235 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 SEPT1Q8WYJ6 367 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 ZNF341Q9BYN7 854 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 C2orf40Q9H1Z8 148 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 ACADSP16219 412 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 CCDC126Q96EE4 140 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 AP1M1Q9BXS5 423 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 PHACTR1Q9C0D0 580 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 VAV3Q9UKW4 847 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 CDC25AP30304 524 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 BCAP31P51572 246 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 EDRF1Q3B7T1 1238 aa15.45■□□□□ 0.06
CCDC50-201ENST00000392455 CAPN1P07384 714 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 C11orf57Q6ZUT1 292 aaPredicted RBP15.44■□□□□ 0.06
CCDC50-201ENST00000392455 FRMD8Q9BZ67 464 aaPredicted RBP15.44■□□□□ 0.06
CCDC50-201ENST00000392455 PITPNM2Q9BZ72 1349 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 A0A087WWV3 80 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 TRIQKQ629K1 86 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 OOSP2Q86WS3 158 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 CHAMP1Q96JM3 812 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 UBXN6Q9BZV1 441 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 SPTLC3Q9NUV7 552 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 MTO1Q9Y2Z2 717 aaKnown RBP15.44■□□□□ 0.06
CCDC50-201ENST00000392455 MTSS1O43312 755 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 COPB2P35606 906 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 EIF4A3P38919 411 aaKnown RBP15.44■□□□□ 0.06
CCDC50-201ENST00000392455 LRRC74AQ0VAA2 488 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 GSTA3Q16772 222 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 NDUFAF6Q330K2 333 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 TJP2Q9UDY2 1190 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 PYCARDQ9ULZ3 195 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 A8MXQ7 604 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 BBOX1O75936 387 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 ZNF235Q14590 738 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 CYP4A22Q5TCH4 519 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 PDCD6IPQ8WUM4 868 aaKnown RBP15.44■□□□□ 0.06
CCDC50-201ENST00000392455 COPRSQ9NQ92 184 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 SH2B2O14492 632 aaPredicted RBP15.44■□□□□ 0.06
CCDC50-201ENST00000392455 ATP6V1C1P21283 382 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 HIST2H2ACQ16777 129 aaPredicted RBP15.44■□□□□ 0.06
CCDC50-201ENST00000392455 HIST2H2AA3Q6FI13 130 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 TMC5Q6UXY8 1006 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 NSUN7Q8NE18 718 aaKnown RBP15.44■□□□□ 0.06
CCDC50-201ENST00000392455 PSMA8Q8TAA3 256 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 SERPINB12Q96P63 405 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 CYP2D7A0A087X1C5 515 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 PNMA6FA0A0J9YX94 578 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 CCDC189A1A4V9 331 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 RIN3Q8TB24 985 aa15.44■□□□□ 0.06
CCDC50-201ENST00000392455 TMEM2Q9UHN6 1383 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 EIF3HO15372 352 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 HDLBPQ00341 1268 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 TCEAL5Q5H9L2 206 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 ADAM22Q9P0K1 906 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 KRT17Q04695 432 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 ARMC6Q6NXE6 501 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 GPR141Q7Z602 305 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 STX12Q86Y82 276 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 OR6B3Q8NGW1 331 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 ANAPC7Q9UJX3 599 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 EIF2AK2P19525 551 aaKnown RBP15.43■□□□□ 0.06
CCDC50-201ENST00000392455 MAPK1P28482 360 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 SDC4P31431 198 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 SLC1A1P43005 524 aa15.43■□□□□ 0.06
CCDC50-201ENST00000392455 TSC22D1Q15714 1073 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms