RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 WDR49Q8IV35 697 aa19.84■□□□□ 0.77
STRADB-202ENST00000392249 SPOPO43791 374 aa19.83■□□□□ 0.77
STRADB-202ENST00000392249 RNF40O75150 1001 aa19.83■□□□□ 0.77
STRADB-202ENST00000392249 CST3P01034 146 aaPredicted RBP19.83■□□□□ 0.77
STRADB-202ENST00000392249 TFDP1Q14186 410 aa19.83■□□□□ 0.77
STRADB-202ENST00000392249 TMEM132AQ24JP5 1023 aa19.83■□□□□ 0.77
STRADB-202ENST00000392249 C2CD6Q53TS8 623 aa19.83■□□□□ 0.77
STRADB-202ENST00000392249 BRI3BPQ8WY22 251 aa19.83■□□□□ 0.77
STRADB-202ENST00000392249 NAP1L3Q99457 506 aaPredicted RBP19.83■□□□□ 0.77
STRADB-202ENST00000392249 CELF4Q9BZC1 486 aaKnown RBP19.83■□□□□ 0.77
STRADB-202ENST00000392249 IMPG2Q9BZV3 1241 aa19.83■□□□□ 0.77
STRADB-202ENST00000392249 SLITRK6Q9H5Y7 841 aa19.83■□□□□ 0.77
STRADB-202ENST00000392249 TTI1O43156 1089 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 C22orf31O95567 290 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 LGALS2P05162 132 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 CFHP08603 1231 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 TBXAS1P24557 533 aaPredicted RBP19.83■□□□□ 0.76
STRADB-202ENST00000392249 SSTR3P32745 418 aaPredicted RBP19.83■□□□□ 0.76
STRADB-202ENST00000392249 OSTNP61366 133 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 NNTQ13423 1086 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 HLTFQ14527 1009 aaKnown RBP eCLIP19.83■□□□□ 0.76
STRADB-202ENST00000392249 PHLDB2Q86SQ0 1253 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 THNSL1Q8IYQ7 743 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 MCOLN2Q8IZK6 566 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 CD101Q93033 1021 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 CYFIP2Q96F07 1278 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 MINDY3Q9H8M7 445 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 ERVK-5Q9HDB9 667 aa19.83■□□□□ 0.76
STRADB-202ENST00000392249 CPSF3Q9UKF6 684 aaKnown RBP19.83■□□□□ 0.76
STRADB-202ENST00000392249 ACKR2O00590 384 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 INSRRP14616 1297 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 GNA15P30679 374 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 PEX5P50542 639 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 GTF2A2P52657 109 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 LAMC2Q13753 1193 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 ZNF568Q3ZCX4 644 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 ATF7IP2Q5U623 682 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 MPZL3Q6UWV2 235 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 TSHZ1Q6ZSZ6 1077 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 DDX42Q86XP3 938 aaKnown RBP eCLIP19.82■□□□□ 0.76
STRADB-202ENST00000392249 PASD1Q8IV76 773 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 RBBP8NLQ8NC74 664 aaPredicted RBP19.82■□□□□ 0.76
STRADB-202ENST00000392249 CCDC26Q8TAB7 109 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 UBE2Q2Q8WVN8 375 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 WNT8AQ9H1J5 351 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 FZD8Q9H461 694 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 IVNS1ABPQ9Y6Y0 642 aa19.82■□□□□ 0.76
STRADB-202ENST00000392249 GH1P01241 217 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 PROZP22891 400 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 ADCYAP1R1P41586 468 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 NSFP46459 744 aaKnown RBP19.81■□□□□ 0.76
STRADB-202ENST00000392249 PTENP60484 403 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 LLGL2Q6P1M3 1020 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 MAMDC4Q6UXC1 1216 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 MAATS1Q7Z4T9 603 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 CEP120Q8N960 986 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 PPP1R16BQ96T49 567 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 ANAPC7Q9UJX3 599 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 ASS1P00966 412 aaKnown RBP19.81■□□□□ 0.76
STRADB-202ENST00000392249 CYP1A1P04798 512 aaPredicted RBP19.81■□□□□ 0.76
STRADB-202ENST00000392249 ZNF286BP0CG31 522 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 RRM1P23921 792 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 AP3M2P53677 418 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 MYL6P60660 151 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 CENPCQ03188 943 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 MBTD1Q05BQ5 628 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 GRM1Q13255 1194 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 EEF1DP3Q658K8 133 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 AFG1LQ8WV93 481 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 TRIM7Q9C029 511 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 PTPRHQ9HD43 1115 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 VTA1Q9NP79 307 aa19.81■□□□□ 0.76
STRADB-202ENST00000392249 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.81■□□□□ 0.76
STRADB-202ENST00000392249 GOLGA6L10A0A0M3HER8 536 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 CSDE1O75534 798 aaKnown RBP19.8■□□□□ 0.76
STRADB-202ENST00000392249 IQCF3P0C7M6 154 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 ECHS1P30084 290 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 CTNNA1P35221 906 aaKnown RBP19.8■□□□□ 0.76
STRADB-202ENST00000392249 TFAMQ00059 246 aaKnown RBP19.8■□□□□ 0.76
STRADB-202ENST00000392249 POU5F1Q01860 360 aaKnown RBP19.8■□□□□ 0.76
STRADB-202ENST00000392249 CUL1Q13616 776 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.8■□□□□ 0.76
STRADB-202ENST00000392249 PYGMP11217 842 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 MAPK4P31152 587 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 DUOXA2Q1HG44 320 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 SEL1L2Q5TEA6 688 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 WHAMMQ8TF30 809 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 FAM204AQ9H8W3 233 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 CNTN6Q9UQ52 1028 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 SLC45A1Q9Y2W3 748 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 MGAMO43451 1857 aa19.8■□□□□ 0.76
STRADB-202ENST00000392249 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.79■□□□□ 0.76
STRADB-202ENST00000392249 CCDC66A2RUB6 948 aa19.79■□□□□ 0.76
STRADB-202ENST00000392249 BHMG1C9JSJ3 638 aaPredicted RBP19.79■□□□□ 0.76
STRADB-202ENST00000392249 THAP12O43422 761 aa19.79■□□□□ 0.76
STRADB-202ENST00000392249 HSF2BPO75031 334 aa19.79■□□□□ 0.76
STRADB-202ENST00000392249 HOXC6P09630 235 aa19.79■□□□□ 0.76
STRADB-202ENST00000392249 ZNF484Q5JVG2 852 aa19.79■□□□□ 0.76
STRADB-202ENST00000392249 MON1BQ7L1V2 547 aa19.79■□□□□ 0.76
STRADB-202ENST00000392249 EFCAB13Q8IY85 973 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms