RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 CDH16O75309 829 aa15.9■□□□□ 0.14
VLDLR-202ENST00000382099 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
VLDLR-202ENST00000382099 ENTPD1P49961 510 aa15.9■□□□□ 0.14
VLDLR-202ENST00000382099 MYLK3Q32MK0 819 aa15.9■□□□□ 0.14
VLDLR-202ENST00000382099 ARHGAP27Q6ZUM4 889 aa15.9■□□□□ 0.14
VLDLR-202ENST00000382099 TTC7BQ86TV6 843 aa15.9■□□□□ 0.14
VLDLR-202ENST00000382099 IFNLR1Q8IU57 520 aaPredicted RBP15.9■□□□□ 0.14
VLDLR-202ENST00000382099 PRICKLE1Q96MT3 831 aaPredicted RBP15.9■□□□□ 0.14
VLDLR-202ENST00000382099 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
VLDLR-202ENST00000382099 EPB41L4AQ9HCS5 686 aaPredicted RBP15.9■□□□□ 0.14
VLDLR-202ENST00000382099 ZBTB21Q9ULJ3 1066 aa15.9■□□□□ 0.14
VLDLR-202ENST00000382099 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.9■□□□□ 0.14
VLDLR-202ENST00000382099 FAM32AQ9Y421 112 aaKnown RBP15.9■□□□□ 0.14
VLDLR-202ENST00000382099 LAMB4A4D0S4 1761 aa15.89■□□□□ 0.14
VLDLR-202ENST00000382099 KANSL1LA0AUZ9 987 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 TTLL13PA6NNM8 815 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 H3BSA7 217 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 C2CD2LO14523 706 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 OCM2P0CE71 109 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 OCMP0CE72 109 aaPredicted RBP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 PDE6AP16499 860 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 MCAMP43121 646 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 TUFMP49411 452 aaKnown RBP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 DRG2P55039 364 aaKnown RBP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 MYBPC2Q14324 1141 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 IRGQQ8WZA9 623 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 PRPF18Q99633 342 aaKnown RBP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 PIH1D3Q9NQM4 214 aaKnown RBP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 COQ6Q9Y2Z9 468 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 GPC6Q9Y625 555 aaPredicted RBP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 PLEKHG4Q58EX7 1191 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 UNC13DQ70J99 1090 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 PRELID2Q8N945 189 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 SCAIQ8N9R8 606 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 STRBPQ96SI9 672 aaKnown RBP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 TUBB6Q9BUF5 446 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 SPZ1Q9BXG8 430 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 ATAD3AQ9NVI7 634 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 SLAIN2Q9P270 581 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 STXBP5LQ9Y2K9 1186 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 E9PBE3 544 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 ADAM23O75077 832 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 TFAP2AP05549 437 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 SLC9A1P19634 815 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 PHBP35232 272 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 PTGIRP43119 386 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 HP1BP3Q5SSJ5 553 aaPredicted RBP15.89■□□□□ 0.13
VLDLR-202ENST00000382099 METTL21CQ5VZV1 264 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 NLRP10Q86W26 655 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 BBS5Q8N3I7 341 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 ALG3Q92685 438 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 ZHX3Q9H4I2 956 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 TBC1D30Q9Y2I9 924 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 TELO2Q9Y4R8 837 aa15.89■□□□□ 0.13
VLDLR-202ENST00000382099 TTC4O95801 387 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 PEX2P28328 305 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 SLC5A2P31639 672 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 RPA3P35244 121 aaPredicted RBP15.88■□□□□ 0.13
VLDLR-202ENST00000382099 TECP42680 631 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 TRAPPC10P48553 1259 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 KPNA1P52294 538 aaPredicted RBP15.88■□□□□ 0.13
VLDLR-202ENST00000382099 SV2BQ7L1I2 683 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 ICA1LQ8NDH6 482 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 GDPD5Q8WTR4 605 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 TNFRSF25Q93038 417 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 CCDC124Q96CT7 223 aaKnown RBP15.88■□□□□ 0.13
VLDLR-202ENST00000382099 NACAP1Q9BZK3 213 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 ANKRD2Q9GZV1 360 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 TRABDQ9H4I3 376 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 ANKFY1Q9P2R3 1169 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 FLT1P17948 1338 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 PRKCIP41743 596 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 KRT81Q14533 505 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 CCDC153Q494R4 210 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 ANKDD1AQ495B1 522 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 SEL1L2Q5TEA6 688 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 PDSS2Q86YH6 399 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 RAVER1Q8IY67 606 aaKnown RBP15.88■□□□□ 0.13
VLDLR-202ENST00000382099 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
VLDLR-202ENST00000382099 USP33Q8TEY7 942 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 CNBD2Q96M20 576 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 PANX3Q96QZ0 392 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 DMTF1Q9Y222 760 aa15.88■□□□□ 0.13
VLDLR-202ENST00000382099 IRS4O14654 1257 aaPredicted RBP15.87■□□□□ 0.13
VLDLR-202ENST00000382099 FOXD2O60548 495 aaPredicted RBP15.87■□□□□ 0.13
VLDLR-202ENST00000382099 PMLP29590 882 aa15.87■□□□□ 0.13
VLDLR-202ENST00000382099 LVRNQ6Q4G3 990 aa15.87■□□□□ 0.13
VLDLR-202ENST00000382099 Q6ZNX1 250 aa15.87■□□□□ 0.13
VLDLR-202ENST00000382099 POU5F2Q8N7G0 328 aa15.87■□□□□ 0.13
VLDLR-202ENST00000382099 MAGEB6Q8N7X4 407 aa15.87■□□□□ 0.13
VLDLR-202ENST00000382099 CALML4Q96GE6 196 aa15.87■□□□□ 0.13
VLDLR-202ENST00000382099 TRIM55Q9BYV6 548 aa15.87■□□□□ 0.13
VLDLR-202ENST00000382099 TPK1Q9H3S4 243 aa15.87■□□□□ 0.13
VLDLR-202ENST00000382099 RRN3Q9NYV6 651 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms