RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SH2D3AQ9BRG2 576 aa9.55□□□□□ -0.88
GPNMB-202ENST00000381990 LRRC4CQ9HCJ2 640 aa9.55□□□□□ -0.88
GPNMB-202ENST00000381990 ARHGEF3Q9NR81 526 aa9.55□□□□□ -0.88
GPNMB-202ENST00000381990 GRHL1Q9NZI5 618 aa9.55□□□□□ -0.88
GPNMB-202ENST00000381990 MYH9P35579 1960 aaKnown RBP9.55□□□□□ -0.88
GPNMB-202ENST00000381990 ARID2Q68CP9 1835 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 ANKRD62A6NC57 917 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 IQCA1LA6NCM1 817 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 RIPK2O43353 540 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 WFS1O76024 890 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 UBOX5O94941 541 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 RFX1P22670 979 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 EDNRBP24530 442 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 NCKAP1LP55160 1127 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 SNRPFP62306 86 aaKnown RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 IFI35P80217 286 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 LACTBP83111 547 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 PPARDQ03181 441 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 GRIK3Q13003 919 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 MOGSQ13724 837 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 FAM102BQ5T8I3 360 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 C11orf63Q6NUN7 778 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 TRMT10CQ7L0Y3 403 aaKnown RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 TRMT1LQ7Z2T5 733 aaKnown RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 C12orf56Q8IXR9 622 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 KIFAP3Q92845 792 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 KLHL29Q96CT2 875 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 ECT2Q9H8V3 914 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 RXFP1Q9HBX9 757 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 OSGEPQ9NPF4 335 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 GPRC5CQ9NQ84 441 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 ABCF3Q9NUQ8 709 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 NR2E1Q9Y466 385 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 CNMDO75829 334 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 GJB6O95452 261 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 SUPT20HL2P0C7V6 817 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 CTNNA2P26232 953 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 PTGIRP43119 386 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 PEX3P56589 373 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 ATP11AP98196 1134 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 SP2Q02086 613 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 SP4Q02446 784 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 EAPPQ56P03 285 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 LDLRAD1Q5T700 205 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 CCDC60Q8IWA6 550 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 LNX1Q8TBB1 728 aaPredicted RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 MORC4Q8TE76 937 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 DYDC1Q8WWB3 177 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 GLG1Q92896 1179 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 THOC1Q96FV9 657 aaKnown RBP9.54□□□□□ -0.88
GPNMB-202ENST00000381990 CEP170P1Q96L14 293 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 SERPINB12Q96P63 405 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 SYT11Q9BT88 431 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 C17orf75Q9HAS0 396 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 AGAP1Q9UPQ3 857 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 ARL2BPQ9Y2Y0 163 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 SNX24Q9Y343 169 aa9.54□□□□□ -0.88
GPNMB-202ENST00000381990 SOWAHBA6NEL2 793 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 EXOC3O60645 756 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 ATG7O95352 703 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 KRT13P13646 458 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 ATP2A2P16615 1042 aaKnown RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 OSBPP22059 807 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 PRKCEQ02156 737 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 MAP2K1Q02750 393 aaPredicted RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 CCDC15Q0P6D6 951 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 FSTL1Q12841 308 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 AUHQ13825 339 aaKnown RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 C11orf91Q3C1V1 193 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 XKR3Q5GH77 459 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 SEPT14Q6ZU15 432 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 MCPH1Q8NEM0 835 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 TRIM7Q9C029 511 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 SEMA4AQ9H3S1 761 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 ERVK-5Q9HDB9 667 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 SLC5A4Q9NY91 659 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 CORO1CQ9ULV4 474 aaPredicted RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 L3MBTL1Q9Y468 752 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 IGSF9BQ9UPX0 1349 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 IGF2BP3O00425 579 aaKnown RBP eCLIP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 SLC16A4O15374 487 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 DGAT1O75907 488 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 RPL21P46778 160 aaKnown RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 KCNJ2P63252 427 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 DMP1Q13316 513 aaPredicted RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 GPR162Q16538 588 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 CYP1B1Q16678 543 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 ASRGL1Q7L266 308 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 GLYCTKQ8IVS8 523 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 OLIG1Q8TAK6 271 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 VTI1AQ96AJ9 217 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 GRAMD1AQ96CP6 724 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 SPDL1Q96EA4 605 aa9.53□□□□□ -0.88
GPNMB-202ENST00000381990 RAB3IPQ96QF0 476 aaPredicted RBP9.53□□□□□ -0.88
GPNMB-202ENST00000381990 RPS6KC1Q96S38 1066 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms