RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 CGRRF1Q99675 332 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 C17orf80Q9BSJ5 609 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 THAP9Q9H5L6 903 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 GOLGA2P5Q9HBQ8 144 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 SAMSN1Q9NSI8 373 aaKnown RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 DPP3Q9NY33 737 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 CACNG4Q9UBN1 327 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 FAN1Q9Y2M0 1017 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 RWDD3Q9Y3V2 267 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 NFE2L3Q9Y4A8 694 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 PCDHB12Q9Y5F1 795 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 NT5C1B-RDH14C9J2C7 533 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 CAVIN2O95810 425 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 LRPAP1P30533 357 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 PBX3P40426 434 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 OR1G1P47890 313 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 GUCY2FP51841 1108 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 ZNF445P59923 1031 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 EPC2Q52LR7 807 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 SCARA3Q6AZY7 606 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 DCLRE1AQ6PJP8 1040 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 LRSAM1Q6UWE0 723 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 USP37Q86T82 979 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 CXorf38Q8TB03 319 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 UROC1Q96N76 676 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 ZNF558Q96NG5 402 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 SAMD11Q96NU1 681 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 COLEC11Q9BWP8 271 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 PLVAPQ9BX97 442 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
PDGFB-202ENST00000381551 PDCD11Q14690 1871 aaKnown RBP16.72■□□□□ 0.27
PDGFB-202ENST00000381551 RALGAPA2Q2PPJ7 1873 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 ANO9A1A5B4 782 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 CARNS1A5YM72 827 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 C5orf67F2Z3F1 127 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 PIRO00625 290 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 C4BPAP04003 597 aaKnown RBP16.72■□□□□ 0.27
PDGFB-202ENST00000381551 RB1P06400 928 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 IGFBP6P24592 240 aaPredicted RBP16.72■□□□□ 0.27
PDGFB-202ENST00000381551 AP3M2P53677 418 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 MYL5Q02045 173 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 PPP3CAQ08209 521 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 IQCB1Q15051 598 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 HABP4Q5JVS0 413 aaKnown RBP16.72■□□□□ 0.27
PDGFB-202ENST00000381551 CD300LGQ6UXG3 332 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 TRIM59Q8IWR1 403 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 DHX40Q8IX18 779 aaKnown RBP16.72■□□□□ 0.27
PDGFB-202ENST00000381551 SLC39A11Q8N1S5 342 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 SPG21Q9NZD8 308 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 CHD9Q3L8U1 2897 aa16.72■□□□□ 0.27
PDGFB-202ENST00000381551 F8W810 466 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 PODXLO00592 558 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 TNNC2P02585 160 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 TMEM191BP0C7N4 346 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 TRIM49P0CI25 452 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 TRIM49CP0CI26 452 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 GTF2H1P32780 548 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 CDKAL1Q5VV42 579 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 C9orf57Q5W0N0 161 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 C15orf39Q6ZRI6 1047 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 SV2AQ7L0J3 742 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 TMEM173Q86WV6 379 aaPredicted RBP16.71■□□□□ 0.27
PDGFB-202ENST00000381551 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 AOPEPQ8N6M6 819 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 KLHL23Q8NBE8 558 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 SLC35C1Q96A29 364 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 IGSF21Q96ID5 467 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 ANKRD36BP1Q96IX9 119 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 MTMR12Q9C0I1 747 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 HSD3B7Q9H2F3 369 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 ZNF576Q9H609 170 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 CERS4Q9HA82 394 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 MARCH5Q9NX47 278 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 MTUS1Q9ULD2 1270 aa16.71■□□□□ 0.27
PDGFB-202ENST00000381551 PRG3Q9Y2Y8 225 aaPredicted RBP16.71■□□□□ 0.27
PDGFB-202ENST00000381551 SMTNL1A8MU46 457 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 B3GAT3O94766 335 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 EFEMP2O95967 443 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 CST3P01034 146 aaPredicted RBP16.7■□□□□ 0.26
PDGFB-202ENST00000381551 ITGB3P05106 788 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 ITGB1P05556 798 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 CTNNB1P35222 781 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 GCLMP48507 274 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 RBP5P82980 135 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 PLCB3Q01970 1234 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 HSP90AA4PQ58FG1 418 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 C3orf58Q8NDZ4 430 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 BCL7CQ8WUZ0 217 aaPredicted RBP16.7■□□□□ 0.26
PDGFB-202ENST00000381551 LRCH3Q96II8 777 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 CNOT6LQ96LI5 555 aaKnown RBP16.7■□□□□ 0.26
PDGFB-202ENST00000381551 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 CBX8Q9HC52 389 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 SIX4Q9UIU6 781 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 ITGA11Q9UKX5 1188 aa16.7■□□□□ 0.26
PDGFB-202ENST00000381551 AGAP1Q9UPQ3 857 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms