RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 RPS6KC1Q96S38 1066 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 MSTO1Q9BUK6 570 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 ASCC2Q9H1I8 757 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 RBAKQ9NYW8 714 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 ADGRA2Q96PE1 1338 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 CNTNAP2Q9UHC6 1331 aa8.53□□□□□ -1.04
PDLIM5-204ENST00000380176 A0A0B4J269 797 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 TMEM88BA6NKF7 163 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 VGLL3A8MV65 326 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 MIF4GDA9UHW6 222 aaKnown RBP8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 H0YCG3 227 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 H0YGN5 161 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 SOCS7O14512 581 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 SHOX2O60902 331 aaPredicted RBP8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 PIGRP01833 764 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 TNFSF9P41273 254 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 DR1Q01658 176 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 SKIDA1Q1XH10 827 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 HSDL1Q3SXM5 330 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 DAB2IPQ5VWQ8 1189 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 TTC27Q6P3X3 843 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 UBL4BQ8N7F7 174 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 PRPF31Q8WWY3 499 aaKnown RBP8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 DCPSQ96C86 337 aaKnown RBP8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 ZNF668Q96K58 619 aaPredicted RBP8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 RABEP2Q9H5N1 569 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 KIAA1586Q9HCI6 787 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 CALCOCO1Q9P1Z2 691 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 UTP11Q9Y3A2 253 aaKnown RBP8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 NFS1Q9Y697 457 aa8.52□□□□□ -1.04
PDLIM5-204ENST00000380176 A0A0G2JLL6 359 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 SPOPO43791 374 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 ZC3H11AO75152 810 aaKnown RBP eCLIP8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 RPS6KA5O75582 802 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 ACO1P21399 889 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 CTNNA1P35221 906 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 ATP1A2P50993 1020 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 CEP85LQ5SZL2 805 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 DUPD1Q68J44 220 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 PRRT2Q7Z6L0 340 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 CD302Q8IX05 232 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 LRRC71Q8N4P6 559 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 ZBTB10Q96DT7 871 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 CYFIP2Q96F07 1278 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 MAF1Q9H063 256 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 WNT8AQ9H1J5 351 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 YY1AP1Q9H869 796 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 ADARB2Q9NS39 739 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 NUB1Q9Y5A7 615 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 PCDHA3Q9Y5H8 950 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 MROH7Q68CQ1 1323 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 TTC36A6NLP5 189 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 RRM1P23921 792 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 RFC5P40937 340 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 PTGIRP43119 386 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 IRAK1P51617 712 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 PPARDQ03181 441 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 ENPEPQ07075 957 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 WDR44Q5JSH3 913 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 TMC3Q7Z5M5 1100 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 JAMLQ86YT9 394 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 PASD1Q8IV76 773 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 MCOLN2Q8IZK6 566 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.52□□□□□ -1.055e-8■■■■■ 65.3
PDLIM5-204ENST00000380176 NAP1L3Q99457 506 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 ERP44Q9BS26 406 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 RBPJLQ9UBG7 517 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 SNX24Q9Y343 169 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 PCDHB2Q9Y5E7 798 aa8.52□□□□□ -1.05
PDLIM5-204ENST00000380176 GRIN2DO15399 1336 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 ZBTB42B2RXF5 422 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 ADCY3O60266 1144 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 MAFO75444 373 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 CST3P01034 146 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 GJB1P08034 283 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 SRGAP2CP0DJJ0 459 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 SCP2P22307 547 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 CTNNA2P26232 953 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 CUL2Q13617 745 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 NEDD9Q14511 834 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 SIX1Q15475 284 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 TMEM270Q6UE05 265 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 METTL7BQ6UX53 244 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 ENOSF1Q7L5Y1 443 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 PIP4P2Q8N4L2 257 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 TRAPPC12Q8WVT3 735 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 UBLCP1Q8WVY7 318 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 SEPT1Q8WYJ6 367 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 COPS5Q92905 334 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 KCNN1Q92952 543 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 CAPS2Q9BXY5 557 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 NRBP2Q9NSY0 501 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 ZDHHC18Q9NUE0 388 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 UVRAGQ9P2Y5 699 aa8.51□□□□□ -1.05
PDLIM5-204ENST00000380176 ANAPC7Q9UJX3 599 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms