RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 SRGAP2BP0DMP2 458 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 RPA3P35244 121 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 CHRNA2Q15822 529 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ARHGAP27Q6ZUM4 889 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 OTOAQ7RTW8 1153 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 SFR1Q86XK3 245 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ERMNQ8TAM6 284 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 DQX1Q8TE96 717 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 CLPTM1LQ96KA5 538 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ZFRQ96KR1 1074 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 WWP1Q9H0M0 922 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 MROH1Q8NDA8 1641 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 ABCB11O95342 1321 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 NKRFO15226 690 aaKnown RBP eCLIP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 TMEM253P0C7T8 217 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 UQCRBP14927 111 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 HOXD12P35452 270 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 GPC5P78333 572 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 RASA3Q14644 834 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 CAVIN4Q5BKX8 364 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 SLC13A5Q86YT5 568 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 SH3RF3Q8TEJ3 882 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 PYROXD1Q8WU10 500 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 GATA6Q92908 595 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 PLGRKTQ9HBL7 147 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 GID8Q9NWU2 228 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 PCDHA12Q9UN75 941 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 MAFGO15525 162 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 KRT38O76015 456 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 VCLP18206 1134 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 NEK2P51955 445 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 ATXN3P54252 364 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 DRG2P55039 364 aaKnown RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 LMNB2Q03252 620 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 ASTE1Q2TB18 679 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 EFHC1Q5JVL4 640 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 NKX2-3Q8TAU0 364 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 PWWP2AQ96N64 755 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 ACAP3Q96P50 834 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 GINM1Q9NU53 330 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 ZDHHC18Q9NUE0 388 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 MYH13Q9UKX3 1938 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 C2CD2LO14523 706 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 IRS4O14654 1257 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 TOM1L1O75674 476 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 KRT5P13647 590 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 MAPK4P31152 587 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 NCKAP1LP55160 1127 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 ARPC4P59998 168 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 MGAT5Q09328 741 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 TRPC3Q13507 836 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 PKN2Q16513 984 aaKnown RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 CENPUQ71F23 418 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 ANKMY2Q8IV38 441 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 ARID3BQ8IVW6 561 aaPredicted RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 RAD54LQ92698 747 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 PPWD1Q96BP3 646 aaKnown RBP11.55□□□□□ -0.56
USP6NL-202ENST00000379237 NINJ2Q9NZG7 142 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 AK5Q9Y6K8 562 aa11.55□□□□□ -0.56
USP6NL-202ENST00000379237 PDE8BO95263 885 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 CD151P48509 253 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 CLCN2P51788 898 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 INHBCP55103 352 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 MTM1Q13496 603 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 MTMR2Q13614 643 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 DPY19L2Q6NUT2 758 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 WNT8AQ9H1J5 351 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 TRNAU1APQ9NX07 287 aaKnown RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 CEP170BQ9Y4F5 1589 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 KAT6BQ8WYB5 2073 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 MYH6P13533 1939 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 MEI4A8MW99 385 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 MATN2O00339 956 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 SPTLC1O15269 473 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 FOXP2O15409 715 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 TBC1D12O60347 775 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 TNFAIP8O95379 198 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 CHKAP35790 457 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 NUP107P57740 925 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 PDIA2Q13087 525 aaKnown RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 BBS9Q3SYG4 887 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 DHDDSQ86SQ9 333 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 NLRP10Q86W26 655 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 FAM186BQ8IYM0 893 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 RASGEF1CQ8N431 466 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 SLC7A6OSQ96CW6 309 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 LOC100653049A0A140TA62 436 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 SFI1A8K8P3 1242 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 SNAP23O00161 211 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 KRT34O76011 436 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 APOEP02649 317 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 ADRA1DP25100 572 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 EEF1DP29692 281 aaKnown RBP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 SOX5P35711 763 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 HDAC4P56524 1084 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 YWHAGP61981 247 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP6NL-202ENST00000379237 PDK4Q16654 411 aa11.54□□□□□ -0.56
USP6NL-202ENST00000379237 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms