RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 ALKAL1Q6UXT8 129 aa22.7■■□□□ 1.22
RNF38-205ENST00000377877 TOGARAM2Q6ZUX3 1019 aa22.7■■□□□ 1.22
RNF38-205ENST00000377877 IRF2BP2Q7Z5L9 587 aa22.7■■□□□ 1.22
RNF38-205ENST00000377877 CHST12Q9NRB3 414 aa22.7■■□□□ 1.22
RNF38-205ENST00000377877 ZNHIT6Q9NWK9 470 aaKnown RBP22.7■■□□□ 1.22
RNF38-205ENST00000377877 AIPL1Q9NZN9 384 aa22.7■■□□□ 1.22
RNF38-205ENST00000377877 FOXN3O00409 490 aaPredicted RBP22.69■■□□□ 1.22
RNF38-205ENST00000377877 TMEM191BP0C7N4 346 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 COL6A1P12109 1028 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 GUCY2FP51841 1108 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 PAK2Q13177 524 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 NCOA4Q13772 614 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 PPM1KQ8N3J5 372 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 APOBEC3GQ9HC16 384 aaKnown RBP22.69■■□□□ 1.22
RNF38-205ENST00000377877 PCDHB2Q9Y5E7 798 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 MEIS3P2A8K0S8 358 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 MYL6P60660 151 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 DSC3Q14574 896 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 SYN2Q92777 582 aaPredicted RBP22.69■■□□□ 1.22
RNF38-205ENST00000377877 PPP1R13BQ96KQ4 1090 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 SNX27Q96L92 541 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 NT5C1BQ96P26 610 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 PARP2Q9UGN5 583 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 SIX4Q9UIU6 781 aa22.69■■□□□ 1.22
RNF38-205ENST00000377877 GPNMBQ14956 572 aa22.68■■□□□ 1.22
RNF38-205ENST00000377877 C1orf127Q8N9H9 656 aa22.68■■□□□ 1.22
RNF38-205ENST00000377877 CXorf38Q8TB03 319 aa22.68■■□□□ 1.22
RNF38-205ENST00000377877 ANKRD36BP1Q96IX9 119 aa22.68■■□□□ 1.22
RNF38-205ENST00000377877 DESI2Q9BSY9 194 aa22.68■■□□□ 1.22
RNF38-205ENST00000377877 NUCKS1Q9H1E3 243 aaKnown RBP22.68■■□□□ 1.22
RNF38-205ENST00000377877 NHEJ1Q9H9Q4 299 aaPredicted RBP22.68■■□□□ 1.22
RNF38-205ENST00000377877 PLEKHA5Q9HAU0 1116 aa22.68■■□□□ 1.22
RNF38-205ENST00000377877 SQORQ9Y6N5 450 aa22.68■■□□□ 1.22
RNF38-205ENST00000377877 UMODL1Q5DID0 1318 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 F8VZ95 297 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 TNNC2P02585 160 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 ZSCAN20P17040 1043 aaPredicted RBP22.67■■□□□ 1.22
RNF38-205ENST00000377877 CBX1P83916 185 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 CDK17Q00537 523 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 CAGE1Q8TC20 777 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 KIF12Q96FN5 646 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 FAM105AQ9NUU6 356 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 MYO6Q9UM54 1294 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 NUB1Q9Y5A7 615 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 GFPT2O94808 682 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 SELPP16109 830 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 YARSP54577 528 aaKnown RBP22.67■■□□□ 1.22
RNF38-205ENST00000377877 TLE2Q04725 743 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 TMEM132DQ14C87 1099 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 TRIM60Q495X7 471 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 GLRA4Q5JXX5 417 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 LRRC8DQ7L1W4 858 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 ANKRD33Q7Z3H0 272 aa22.67■■□□□ 1.22
RNF38-205ENST00000377877 RTN4RL1Q86UN2 441 aaPredicted RBP22.67■■□□□ 1.22
RNF38-205ENST00000377877 SLU7O95391 586 aaKnown RBP22.66■■□□□ 1.22
RNF38-205ENST00000377877 SOX5P35711 763 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 EIF4A3P38919 411 aaKnown RBP22.66■■□□□ 1.22
RNF38-205ENST00000377877 FAAP100Q0VG06 881 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 ZBTB6Q15916 424 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 WDR44Q5JSH3 913 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 CD302Q8IX05 232 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 USP38Q8NB14 1042 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 LPPQ93052 612 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 PAWRQ96IZ0 340 aaKnown RBP22.66■■□□□ 1.22
RNF38-205ENST00000377877 ADAM2Q99965 735 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 C2CD2Q9Y426 696 aa22.66■■□□□ 1.22
RNF38-205ENST00000377877 EPN1Q9Y6I3 576 aaPredicted RBP22.66■■□□□ 1.22
RNF38-205ENST00000377877 ZC3H11AO75152 810 aaKnown RBP eCLIP22.65■■□□□ 1.22
RNF38-205ENST00000377877 ASS1P00966 412 aaKnown RBP22.65■■□□□ 1.22
RNF38-205ENST00000377877 STAT1P42224 750 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 ASIC2Q16515 512 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 C18orf25Q96B23 403 aaPredicted RBP22.65■■□□□ 1.22
RNF38-205ENST00000377877 XYLT2Q9H1B5 865 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 OGFRQ9NZT2 677 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 NBNO60934 754 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 ITGB3P05106 788 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 KRT19P08727 400 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 RFX1P22670 979 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 TRPC3Q13507 836 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 XKR4Q5GH76 650 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 DPP3Q9NY33 737 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 CNTN3Q9P232 1028 aa22.65■■□□□ 1.22
RNF38-205ENST00000377877 SMIM28A0A1B0GU29 152 aa22.64■■□□□ 1.21
RNF38-205ENST00000377877 EVI5O60447 810 aa22.64■■□□□ 1.21
RNF38-205ENST00000377877 SERPING1P05155 500 aa22.64■■□□□ 1.21
RNF38-205ENST00000377877 AFF1P51825 1210 aaKnown RBP22.64■■□□□ 1.21
RNF38-205ENST00000377877 MFAP3P55082 362 aa22.64■■□□□ 1.21
RNF38-205ENST00000377877 NOP14P78316 857 aaKnown RBP22.64■■□□□ 1.21
RNF38-205ENST00000377877 BFSP2Q13515 415 aa22.64■■□□□ 1.21
RNF38-205ENST00000377877 ACRBPQ8NEB7 543 aa22.64■■□□□ 1.21
RNF38-205ENST00000377877 TET1Q8NFU7 2136 aa22.64■■□□□ 1.21
RNF38-205ENST00000377877 IFIH1Q9BYX4 1025 aaKnown RBP22.64■■□□□ 1.21
RNF38-205ENST00000377877 HAUS4Q9H6D7 363 aa22.64■■□□□ 1.21
RNF38-205ENST00000377877 A0A0U1RQJ8 604 aa22.63■■□□□ 1.21
RNF38-205ENST00000377877 NDUFA10O95299 355 aa22.63■■□□□ 1.21
RNF38-205ENST00000377877 IBSPP21815 317 aaPredicted RBP22.63■■□□□ 1.21
RNF38-205ENST00000377877 KLHL30Q0D2K2 578 aa22.63■■□□□ 1.21
RNF38-205ENST00000377877 SGSM1Q2NKQ1 1148 aa22.63■■□□□ 1.21
RNF38-205ENST00000377877 ASTE1Q2TB18 679 aaPredicted RBP22.63■■□□□ 1.21
RNF38-205ENST00000377877 MRPL10Q7Z7H8 261 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms