RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 KAT2BQ92831 832 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 MMS19Q96T76 1030 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 KIFC3Q9BVG8 833 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 STK33Q9BYT3 514 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 MUC3BQ9H195 1237 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 R3HDMLQ9H3Y0 253 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 PCIF1Q9H4Z3 704 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 DOCK5Q9H7D0 1870 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 IL20Q9NYY1 176 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 LZTS1Q9Y250 596 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 USP20Q9Y2K6 914 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 MAFBQ9Y5Q3 323 aaPredicted RBP13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 SQORQ9Y6N5 450 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 ADGRA3Q8IWK6 1321 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
CEACAM1-205ENST00000377806 ANKRD63C9JTQ0 380 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 DGAT1O75907 488 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ADRB2P07550 413 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 KLRC1P26715 233 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 VAMP7P51809 220 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 SOX10P56693 466 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 PPP3CAQ08209 521 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ZBTB17Q13105 803 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 USP4Q13107 963 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 BIRC3Q13489 604 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 SH2D4BQ5SQS7 431 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 C10orf76Q5T2E6 689 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 THOC7Q6I9Y2 204 aaKnown RBP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 CAPRIN2Q6IMN6 1127 aaKnown RBP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 SLC39A4Q6P5W5 647 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 TRMT1LQ7Z2T5 733 aaKnown RBP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ZNF572Q7Z3I7 529 aaPredicted RBP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ANKRD35Q8N283 1001 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ANKRD13CQ8N6S4 541 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 SH3TC2Q8TF17 1288 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 PACSIN1Q9BY11 444 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ASCC2Q9H1I8 757 aaPredicted RBP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 CYP26B1Q9NR63 512 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 CIDEBQ9UHD4 219 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 DNAJC12Q9UKB3 198 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 PHF24Q9UPV7 400 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ENO4A6NNW6 628 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 PDE2AO00408 941 aaPredicted RBP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ZNF185O15231 689 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 KRT13P13646 458 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 S100A5P33763 92 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 CA8P35219 290 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 SOX5P35711 763 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 STAT1P42224 750 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 FNTAP49354 379 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 DMP1Q13316 513 aaPredicted RBP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 PPIL2Q13356 520 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 SMC1AQ14683 1233 aaKnown RBP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 XKR3Q5GH77 459 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 NEK10Q6ZWH5 1172 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 CREG2Q8IUH2 290 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 MCPH1Q8NEM0 835 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 SLC30A5Q8TAD4 765 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 FGD4Q96M96 766 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 FBXL18Q96ME1 805 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 NOX5Q96PH1 765 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 PNKPQ96T60 521 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 ZNF304Q9HCX3 659 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 APEX2Q9UBZ4 518 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 NAGPAQ9UK23 515 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 EXOC7Q9UPT5 735 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 AGTPBP1Q9UPW5 1226 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 CARD8Q9Y2G2 431 aa13.3□□□□□ -0.28
CEACAM1-205ENST00000377806 EMSYQ7Z589 1322 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 DENND3A2RUS2 1198 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 POTEB2H3BUK9 544 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.282e-26■■□□□ 13.5
CEACAM1-205ENST00000377806 SGTAO43765 313 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 GFPT2O94808 682 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 SKIP12755 728 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 SMTNP53814 917 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 DRAP1Q14919 205 aaPredicted RBP13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 ENOX2Q16206 610 aaKnown RBP13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 CYFIP1Q7L576 1253 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 TRPC4APQ8TEL6 797 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 PCYT2Q99447 389 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 TLR10Q9BXR5 811 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 ZWILCHQ9H900 591 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 KMT5AQ9NQR1 393 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 ARHGAP28Q9P2N2 729 aa13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
CEACAM1-205ENST00000377806 GSTTP1A0A1W2PQM5 241 aa13.28□□□□□ -0.28
CEACAM1-205ENST00000377806 BUB1O43683 1085 aa13.28□□□□□ -0.28
CEACAM1-205ENST00000377806 SORBS3O60504 671 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms