RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 TEX33O43247 280 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 STX10O60499 249 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 VNN1O95497 513 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 THP07101 528 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 AP3M2P53677 418 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 KRT39Q6A163 491 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 TRAPPC11Q7Z392 1133 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 ABI1Q8IZP0 508 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 TAS1R2Q8TE23 839 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 ANKRD36BP1Q96IX9 119 aa23.01■■□□□ 1.27
CBWD3-202ENST00000377342 XPO4Q9C0E2 1151 aaKnown RBP23.01■■□□□ 1.27
CBWD3-202ENST00000377342 PMM2O15305 246 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 LRRN2O75325 713 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 GJB5O95377 273 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 DSC1Q08554 894 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 SHHQ15465 462 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 PTPN21Q16825 1174 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 EPC2Q52LR7 807 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 URGCPQ8TCY9 931 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 SLC9A7Q96T83 725 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 DPP3Q9NY33 737 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 SLC4A7Q9Y6M7 1214 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 TBKBP1A7MCY6 615 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 PES1O00541 588 aaKnown RBP23■■□□□ 1.27
CBWD3-202ENST00000377342 TNNC2P02585 160 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 ITGB3P05106 788 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 CYP3A5P20815 502 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 UBASH3AP57075 661 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 NR1I3Q14994 352 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 PAN2Q504Q3 1202 aaKnown RBP23■■□□□ 1.27
CBWD3-202ENST00000377342 ZNF280BQ86YH2 543 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 SEMA4DQ92854 862 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 SLC38A7Q9NVC3 462 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 COQ4Q9Y3A0 265 aa23■■□□□ 1.27
CBWD3-202ENST00000377342 PPEF2O14830 753 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 N4BP1O75113 896 aaKnown RBP22.99■■□□□ 1.27
CBWD3-202ENST00000377342 DDHD2O94830 711 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 TPM2P07951 284 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 PLCB2Q00722 1185 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 BIRC3Q13489 604 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 HERC6Q8IVU3 1022 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 BEST2Q8NFU1 509 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 CACTINQ8WUQ7 758 aaKnown RBP22.99■■□□□ 1.27
CBWD3-202ENST00000377342 RSPH1Q8WYR4 309 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 MTIF3Q9H2K0 278 aaKnown RBP22.99■■□□□ 1.27
CBWD3-202ENST00000377342 ITGA11Q9UKX5 1188 aa22.99■■□□□ 1.27
CBWD3-202ENST00000377342 LAMA3Q16787 3333 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 NLRC5Q86WI3 1866 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 GTPBP10A4D1E9 387 aaKnown RBP22.98■■□□□ 1.27
CBWD3-202ENST00000377342 P4HA2O15460 535 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 HLA-DRAP01903 254 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 HTRA4P83105 476 aaPredicted RBP22.98■■□□□ 1.27
CBWD3-202ENST00000377342 TUSC3Q13454 348 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 LRRC43Q8N309 656 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 LMO3Q8TAP4 145 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 RNPC3Q96LT9 517 aaKnown RBP22.98■■□□□ 1.27
CBWD3-202ENST00000377342 PAAF1Q9BRP4 392 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 MRPL9Q9BYD2 267 aaKnown RBP22.98■■□□□ 1.27
CBWD3-202ENST00000377342 UBE2OQ9C0C9 1292 aaKnown RBP22.98■■□□□ 1.27
CBWD3-202ENST00000377342 GCNT4Q9P109 453 aa22.98■■□□□ 1.27
CBWD3-202ENST00000377342 TSC2P49815 1807 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 ANO9A1A5B4 782 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 CASTOR2A6NHX0 329 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 XPOTO43592 962 aaKnown RBP22.97■■□□□ 1.27
CBWD3-202ENST00000377342 CST3P01034 146 aaPredicted RBP22.97■■□□□ 1.27
CBWD3-202ENST00000377342 ATP2A2P16615 1042 aaKnown RBP22.97■■□□□ 1.27
CBWD3-202ENST00000377342 LRPAP1P30533 357 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 POLR2BP30876 1174 aaKnown RBP22.97■■□□□ 1.27
CBWD3-202ENST00000377342 UBXN1Q04323 297 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 KCNMA1Q12791 1236 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 FILIP1LQ4L180 1135 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 C9orf57Q5W0N0 161 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 COLGALT2Q8IYK4 626 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 FBXL13Q8NEE6 735 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 PHOSPHO2Q8TCD6 241 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 CRACR2AQ9BSW2 395 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 KANSL3Q9P2N6 904 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 DNAJB4Q9UDY4 337 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 SIK3Q9Y2K2 1263 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 IGFBP6P24592 240 aaPredicted RBP22.97■■□□□ 1.27
CBWD3-202ENST00000377342 PBX1P40424 430 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 PIK3CAP42336 1068 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 NCOA4Q13772 614 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 FKBP15Q5T1M5 1219 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 FAM109BQ6ICB4 259 aaPredicted RBP22.97■■□□□ 1.27
CBWD3-202ENST00000377342 CMTR2Q8IYT2 770 aaKnown RBP22.97■■□□□ 1.27
CBWD3-202ENST00000377342 ELMO3Q96BJ8 720 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 ERGIC2Q96RQ1 377 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 XYLT2Q9H1B5 865 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 NRDE2Q9H7Z3 1164 aa22.97■■□□□ 1.27
CBWD3-202ENST00000377342 KLK7P49862 253 aa22.96■■□□□ 1.27
CBWD3-202ENST00000377342 DPY19L2P1Q6NXN4 242 aa22.96■■□□□ 1.27
CBWD3-202ENST00000377342 C3orf58Q8NDZ4 430 aa22.96■■□□□ 1.27
CBWD3-202ENST00000377342 TRIM5Q9C035 493 aa22.96■■□□□ 1.27
CBWD3-202ENST00000377342 RAB20Q9NX57 234 aa22.96■■□□□ 1.27
CBWD3-202ENST00000377342 PIRO00625 290 aa22.95■■□□□ 1.26
CBWD3-202ENST00000377342 PHACTR2O75167 634 aa22.95■■□□□ 1.26
CBWD3-202ENST00000377342 KRT19P08727 400 aa22.95■■□□□ 1.26
CBWD3-202ENST00000377342 CLCNKBP51801 687 aa22.95■■□□□ 1.26
CBWD3-202ENST00000377342 ZNF75DP51815 510 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms