RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 KLRC2P26717 231 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 GBP1P32455 592 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 RAP1GAPP47736 663 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 MDM2Q00987 491 aaPredicted RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 TLE2Q04725 743 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 HS1BP3Q53T59 392 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 DENND2CQ68D51 928 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 MMS22LQ6ZRQ5 1243 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 SV2AQ7L0J3 742 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 PALB2Q86YC2 1186 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 PGBD3Q8N328 593 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 TTC39CQ8N584 583 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 KCTD17Q8N5Z5 321 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 CEP120Q8N960 986 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 MAIP1Q8WWC4 291 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 RIN2Q8WYP3 895 aaPredicted RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 SCLYQ96I15 445 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 PAWRQ96IZ0 340 aaKnown RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 ABHD10Q9NUJ1 306 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 PPP1R3GB7ZBB8 358 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 ZRANB2O95218 330 aaKnown RBP eCLIP9□□□□□ -0.97
CRNKL1-202ENST00000377340 KRT3P12035 628 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 PDGFRAP16234 1089 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 GPC5P78333 572 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 BASP1P80723 227 aaKnown RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 MTHFD1LQ6UB35 978 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 ENOSF1Q7L5Y1 443 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 DHX40Q8IX18 779 aaKnown RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 SUDS3Q9H7L9 328 aaPredicted RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 TJP2Q9UDY2 1190 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 TLL2Q9Y6L7 1015 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 SCINQ9Y6U3 715 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 ROBO3Q96MS0 1386 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 SCN11AQ9UI33 1791 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 BUB1BO60566 1050 aaPredicted RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 AP1G2O75843 785 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 CALB1P05937 261 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 ODC1P11926 461 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 MRPS6P82932 125 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 DCAF6Q58WW2 860 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 FBXO47Q5MNV8 452 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 PPTC7Q8NI37 304 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 DHX38Q92620 1227 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 NUP85Q9BW27 656 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 RPTORQ8N122 1335 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 PLCH1Q4KWH8 1693 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 MCF2LO15068 1137 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 TCP1P17987 556 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 MUTP22033 750 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 SCP2P22307 547 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 NNMTP40261 264 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 CDH8P55286 799 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 CDK17Q00537 523 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 ITIH3Q06033 890 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 ZNF211Q13398 564 aaPredicted RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 C10orf120Q5SQS8 335 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 CTU1Q7Z7A3 348 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 RBM23Q86U06 439 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 PALM2Q8IXS6 379 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 CCDC170Q8IYT3 715 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 HVCN1Q96D96 273 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 CHP1Q99653 195 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 SEMA6BQ9H3T3 888 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 ANKRD63C9JTQ0 380 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC16A3O15427 465 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 TLL1O43897 1013 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 RPLP2P05387 115 aaKnown RBP8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC10A3P09131 477 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 FAM200BP0CF97 657 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 WEE1P30291 646 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC12A2P55011 1212 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 SH3D19Q5HYK7 790 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 LDLRAD1Q5T700 205 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 CYP4A22Q5TCH4 519 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 OVOS1Q6IE37 1185 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 ETNPPLQ8TBG4 499 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 HELQQ8TDG4 1101 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 TBC1D31Q96DN5 1066 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 HSD17B14Q9BPX1 270 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC28A3Q9HAS3 691 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 KLHL11Q9NVR0 708 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 ASNSD1Q9NWL6 643 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 PCDHB2Q9Y5E7 798 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
CRNKL1-202ENST00000377340 GARTP22102 1010 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 KCNA4P22459 653 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 CCND3P30281 292 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 CYP2C18P33260 490 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 SARNPP82979 210 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 YWHAHQ04917 246 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ADCY1Q08828 1119 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 PRIMPOLQ96LW4 560 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 AP1M1Q9BXS5 423 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 ZNF112Q9UJU3 913 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 PACSIN2Q9UNF0 486 aaPredicted RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 HPSEQ9Y251 543 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 MYH14Q7Z406 1995 aaKnown RBP8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 LACTBL1A8MY62 500 aa8.98□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC26A4O43511 780 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms