RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 TBCCQ15814 346 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 DUPD1Q68J44 220 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ACAD11Q709F0 780 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 RCOR2Q8IZ40 523 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 TMEM35BQ8NCS4 154 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 E2F7Q96AV8 911 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 FAM84BQ96KN1 310 aaPredicted RBP9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 EIF2AK1Q9BQI3 630 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 APOL6Q9BWW8 343 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 TMEM117Q9H0C3 514 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ADA2Q9NZK5 511 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 WARS2Q9UGM6 360 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 SLC12A6Q9UHW9 1150 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 LZTS1Q9Y250 596 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 DDX3XO00571 662 aaKnown RBP eCLIP9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ZBED4O75132 1171 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 RALAP11233 206 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 CYP11B2P19099 503 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 HSPA2P54652 639 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 PTK7Q13308 1070 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 JADE1Q6IE81 842 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 PADI6Q6TGC4 694 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 LRRC6Q86X45 466 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 GALNT4Q8N4A0 578 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 FBXL13Q8NEE6 735 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 SCFD1Q8WVM8 642 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 EME1Q96AY2 570 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 CCDC97Q96F63 343 aaPredicted RBP9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 KLHL4Q9C0H6 718 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 BTBD7Q9P203 1132 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ZHX2Q9Y6X8 837 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 MROH1Q8NDA8 1641 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 LOC100653049A0A140TA62 436 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ESYT2A0FGR8 921 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 KDM1AO60341 852 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 KRT34O76011 436 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 CALB1P05937 261 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 TMEM191BP0C7N4 346 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ADRM1Q16186 407 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 TMEM270Q6UE05 265 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 TRIM72Q6ZMU5 477 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ZNF572Q7Z3I7 529 aaPredicted RBP9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 ADGRF4Q8IZF3 695 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 FAM111AQ96PZ2 611 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 COMMD3-BMI1R4GMX3 469 aa9.55□□□□□ -0.88
CRNKL1-201ENST00000377327 A8MUI8 341 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 BTNL10A8MVZ5 291 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 P4HA1P13674 534 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 RRP1BQ14684 758 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 ZNF513Q8N8E2 541 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 NDNQ99608 321 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 VPS11Q9H270 941 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 EBF2Q9HAK2 575 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 TCRBV5S4A2TA0A5A2 114 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 TESPA1A2RU30 521 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 A6NJR5 290 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 KPNA7A9QM74 516 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 RSPH10B2B2RC85 870 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 TNNC2P02585 160 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 KRT7P08729 469 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 RSPH10BP0C881 870 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SERPINB8P50452 374 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 COPAP53621 1224 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 LBRQ14739 615 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 CC2D2BQ6DHV5 1058 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 C11orf63Q6NUN7 778 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 C6orf89Q6UWU4 347 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 ZNF354CQ86Y25 554 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 TMEM120AQ9BXJ8 343 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 DDX56Q9NY93 547 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SEPT10Q9P0V9 454 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 BAZ2BQ9UIF8 2168 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 LRRIQ4A6NIV6 560 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SLC37A4O43826 429 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 PRPSAP2O60256 369 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 ATP2B4P23634 1241 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 CASP4P49662 377 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 MRPS9P82933 396 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 GSTA3Q16772 222 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 KLHL23Q8NBE8 558 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 PFDN4Q9NQP4 134 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 PARVAQ9NVD7 372 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 DDX18Q9NVP1 670 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SLC9A2Q9UBY0 812 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SLC24A2Q9UI40 661 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SSX2IPQ9Y2D8 614 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 FLT1P17948 1338 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 GTPBP10A4D1E9 387 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 DCAF8L1A6NGE4 600 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 MGEA5O60502 916 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SMNDC1O75940 238 aaKnown RBP eCLIP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 AKAP3O75969 853 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 LCA5LO95447 670 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 NPTXRO95502 500 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 ESRRBO95718 433 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 SNRPAP09012 282 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 RARAP10276 462 aa9.54□□□□□ -0.88
CRNKL1-201ENST00000377327 KRT3P12035 628 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms