RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 PI15O43692 258 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 NARSO43776 548 aaKnown RBP10.57□□□□□ -0.72
C9orf85-202ENST00000377027 NEMFO60524 1076 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 USO1O60763 962 aaKnown RBP10.57□□□□□ -0.72
C9orf85-202ENST00000377027 ERLIN2O94905 339 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 NPTXRO95502 500 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 ALDH2P05091 517 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 XBP1P17861 261 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 KLRC2P26717 231 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 AXLP30530 894 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 OR1G1P47890 313 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 CLDN10P78369 228 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 GUCY1B3Q02153 619 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 DSG1Q02413 1049 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 PTSQ03393 145 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 MXD4Q14582 209 aaPredicted RBP10.57□□□□□ -0.72
C9orf85-202ENST00000377027 ECM1Q16610 540 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 ATAT1Q5SQI0 421 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 NOTUMQ6P988 496 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 PRICKLE2Q7Z3G6 844 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 CATSPER3Q86XQ3 398 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 EXOC8Q8IYI6 725 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 UBALD2Q8IYN6 164 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 CCDC51Q96ER9 411 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 KLK14Q9P0G3 267 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 KANSL3Q9P2N6 904 aa10.57□□□□□ -0.72
C9orf85-202ENST00000377027 SPTBN4Q9H254 2564 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 TERTO14746 1132 aaKnown RBP10.56□□□□□ -0.72
C9orf85-202ENST00000377027 BAG4O95429 457 aaKnown RBP10.56□□□□□ -0.72
C9orf85-202ENST00000377027 URODP06132 367 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 SPATA31D3P0C874 917 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 RPL17P18621 184 aaKnown RBP10.56□□□□□ -0.72
C9orf85-202ENST00000377027 GLUD2P49448 558 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 ANKRD1Q15327 319 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 RTP2Q5QGT7 225 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 EEF1DP3Q658K8 133 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 FUT10Q6P4F1 479 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 SLC27A1Q6PCB7 646 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 LILRA6Q6PI73 481 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 C15orf39Q6ZRI6 1047 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 SPATA31D4Q6ZUB0 917 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 MAEAQ7L5Y9 396 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 PPFIBP1Q86W92 1011 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 CNNM3Q8NE01 707 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 CMASQ8NFW8 434 aaPredicted RBP10.56□□□□□ -0.72
C9orf85-202ENST00000377027 RSAD2Q8WXG1 361 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 WASF1Q92558 559 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 FAM193BQ96PV7 902 aaPredicted RBP10.56□□□□□ -0.72
C9orf85-202ENST00000377027 MYADMQ96S97 322 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 KIF2CQ99661 725 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 FZD8Q9H461 694 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 PDZD7Q9H5P4 517 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 MRPL17Q9NRX2 175 aaKnown RBP10.56□□□□□ -0.72
C9orf85-202ENST00000377027 GIT1Q9Y2X7 761 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 FANCMQ8IYD8 2048 aa10.56□□□□□ -0.72
C9orf85-202ENST00000377027 ZMYM2Q9UBW7 1377 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 CARNS1A5YM72 827 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 ADAM12O43184 909 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 TGM5O43548 720 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 MARCH6O60337 910 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 MCM7P33993 719 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 ATP1A2P50993 1020 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 NEK4P51957 841 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 TFDP1Q14186 410 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 PCBP1Q15365 356 aaKnown RBP eCLIP10.55□□□□□ -0.72
C9orf85-202ENST00000377027 PRSS55Q6UWB4 352 aaPredicted RBP10.55□□□□□ -0.72
C9orf85-202ENST00000377027 CD300LGQ6UXG3 332 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 CCDC149Q6ZUS6 474 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 GLYCTKQ8IVS8 523 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 C4orf32Q8N8J7 132 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 ST13P5Q8NFI4 369 aaPredicted RBP10.55□□□□□ -0.72
C9orf85-202ENST00000377027 HASPINQ8TF76 798 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 EMILIN2Q9BXX0 1053 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 KCNK12Q9HB15 430 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 UBN1Q9NPG3 1134 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 DUSP12Q9UNI6 340 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 KIAA1024Q9UPX6 916 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 PATJQ8NI35 1801 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 CLUHO75153 1309 aa10.55□□□□□ -0.72
C9orf85-202ENST00000377027 CCDC195A0A1B0GUA6 201 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 KRBA1A5PL33 1030 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 LRRIQ4A6NIV6 560 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 CITO14578 2027 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 KIF4AO95239 1232 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 COL4A2P08572 1712 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 ATP2B1P20020 1258 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 GRIK3Q13003 919 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
C9orf85-202ENST00000377027 FAM187BQ17R55 369 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 ASCL5Q7RTU5 278 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 PALB2Q86YC2 1186 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 CCDC83Q8IWF9 413 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 PRRX2Q99811 253 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 POLR3CQ9BUI4 534 aaPredicted RBP10.54□□□□□ -0.72
C9orf85-202ENST00000377027 KIFC3Q9BVG8 833 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 RHOBTB2Q9BYZ6 727 aa10.54□□□□□ -0.72
C9orf85-202ENST00000377027 BRMS1Q9HCU9 246 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms