RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 SPA17Q15506 151 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 CCDC127Q96BQ5 260 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 GUCD1Q96NT3 240 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 SLC9A7Q96T83 725 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 MSRAQ9UJ68 235 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 R3HCC1Q9Y3T6 440 aaKnown RBP22.82■■□□□ 1.24
HLA-C-201ENST00000376228 CHD7Q9P2D1 2997 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 SMIM35A0A1B0GVV1 85 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 AKR1B10O60218 316 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 ZC3H11AO75152 810 aaKnown RBP eCLIP22.82■■□□□ 1.24
HLA-C-201ENST00000376228 KLHL30Q0D2K2 578 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 PRPF4BQ13523 1007 aaKnown RBP22.82■■□□□ 1.24
HLA-C-201ENST00000376228 ARHGAP29Q52LW3 1261 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 PHLDB3Q6NSJ2 640 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 MPZL3Q6UWV2 235 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 SV2AQ7L0J3 742 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 SRGAP1Q7Z6B7 1085 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 BRSK2Q8IWQ3 736 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 KIAA0319LQ8IZA0 1049 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 FBXL13Q8NEE6 735 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 PPP1R16BQ96T49 567 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 DEF6Q9H4E7 631 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 AJAP1Q9UKB5 411 aaPredicted RBP22.82■■□□□ 1.24
HLA-C-201ENST00000376228 AKT3Q9Y243 479 aa22.82■■□□□ 1.24
HLA-C-201ENST00000376228 CNTNAP2Q9UHC6 1331 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 ABHD14A-ACY1A0A1B0GW23 586 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 TTLL13PA6NNM8 815 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 F8VZ95 297 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 INO80B-WBP1J3KQ70 363 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 ZNF263O14978 683 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 GFPT2O94808 682 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 CCDC172P0C7W6 258 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 SOX5P35711 763 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 VAV2P52735 878 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 AP3M2P53677 418 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 LPIN1Q14693 890 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 SURF1Q15526 300 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 RAB30Q15771 203 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 ATF7IP2Q5U623 682 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 SYT10Q6XYQ8 523 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.81■■□□□ 1.241e-31■■■■□ 24.7
HLA-C-201ENST00000376228 TXLNBQ8N3L3 684 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 SEPT8Q92599 483 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 FAM81BQ96LP2 452 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 FNBP1Q96RU3 617 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 IFIH1Q9BYX4 1025 aaKnown RBP22.81■■□□□ 1.24
HLA-C-201ENST00000376228 INO80BQ9C086 356 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-201ENST00000376228 MINDY3Q9H8M7 445 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 RBAKQ9NYW8 714 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-201ENST00000376228 ANKFY1Q9P2R3 1169 aa22.81■■□□□ 1.24
HLA-C-201ENST00000376228 A0A087WZ62 844 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 M0QZ92 97 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 MATR3P43243 847 aaKnown RBP eCLIP22.8■■□□□ 1.24
HLA-C-201ENST00000376228 ACOT2P49753 483 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 DRAP1Q14919 205 aaPredicted RBP22.8■■□□□ 1.24
HLA-C-201ENST00000376228 AMHR2Q16671 573 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 ZACNQ401N2 412 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 TDRD12Q587J7 1177 aaKnown RBP22.8■■□□□ 1.24
HLA-C-201ENST00000376228 FBXO47Q5MNV8 452 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 GJB7Q6PEY0 223 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 HERC6Q8IVU3 1022 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 ZNF710Q8N1W2 664 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 FDXACB1Q9BRP7 624 aaPredicted RBP22.8■■□□□ 1.24
HLA-C-201ENST00000376228 GPR88Q9GZN0 384 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 ZNF576Q9H609 170 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 RAB20Q9NX57 234 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 GINS2Q9Y248 185 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 TRPV2Q9Y5S1 764 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 ANK1P16157 1881 aa22.8■■□□□ 1.24
HLA-C-201ENST00000376228 ATP8B3O60423 1300 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 PJA2O43164 708 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 C4BPAP04003 597 aaKnown RBP22.79■■□□□ 1.24
HLA-C-201ENST00000376228 PCBP1Q15365 356 aaKnown RBP eCLIP22.79■■□□□ 1.245e-7■■□□□ 14.4
HLA-C-201ENST00000376228 SLC18A3Q16572 532 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 SMYD5Q6GMV2 418 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 FAM117BQ6P1L5 589 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 ZNF516Q92618 1163 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 POP1Q99575 1024 aaKnown RBP22.79■■□□□ 1.24
HLA-C-201ENST00000376228 CGRRF1Q99675 332 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 TCHPQ9BT92 498 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 TSGA10Q9BZW7 698 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 LZTFL1Q9NQ48 299 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 CPSF3Q9UKF6 684 aaKnown RBP22.79■■□□□ 1.24
HLA-C-201ENST00000376228 PCDHA11Q9Y5I1 949 aa22.79■■□□□ 1.24
HLA-C-201ENST00000376228 KRT86O43790 486 aa22.78■■□□□ 1.24
HLA-C-201ENST00000376228 KIF5CO60282 957 aa22.78■■□□□ 1.24
HLA-C-201ENST00000376228 DLATP10515 647 aaKnown RBP22.78■■□□□ 1.24
HLA-C-201ENST00000376228 C10orf76Q5T2E6 689 aa22.78■■□□□ 1.24
HLA-C-201ENST00000376228 KIAA1328Q86T90 577 aa22.78■■□□□ 1.24
HLA-C-201ENST00000376228 PHOSPHO2Q8TCD6 241 aa22.78■■□□□ 1.24
HLA-C-201ENST00000376228 SEMA4DQ92854 862 aa22.78■■□□□ 1.24
HLA-C-201ENST00000376228 LUC7LQ9NQ29 371 aaKnown RBP22.78■■□□□ 1.24
HLA-C-201ENST00000376228 PCDHA13Q9Y5I0 950 aa22.78■■□□□ 1.24
HLA-C-201ENST00000376228 TMEM265A0A087WTH1 108 aa22.77■■□□□ 1.24
HLA-C-201ENST00000376228 A0A0U1RQJ8 604 aa22.77■■□□□ 1.24
HLA-C-201ENST00000376228 VTNP04004 478 aa22.77■■□□□ 1.24
HLA-C-201ENST00000376228 CA3P07451 260 aa22.77■■□□□ 1.24
HLA-C-201ENST00000376228 CD52P31358 61 aa22.77■■□□□ 1.24
HLA-C-201ENST00000376228 GNG11P61952 73 aa22.77■■□□□ 1.24
HLA-C-201ENST00000376228 GRIN2CQ14957 1233 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms