RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CCDC94Q9BW85 323 aaPredicted RBP11.95□□□□□ -0.5
PDPN-202ENST00000376057 XYLT2Q9H1B5 865 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 GUCA1BQ9UMX6 200 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 JRKLQ9Y4A0 524 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 PCDHB2Q9Y5E7 798 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 TRPV2Q9Y5S1 764 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 MRFAP1Q9Y605 127 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 LACTBL1A8MY62 500 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
PDPN-202ENST00000376057 ASGR1P07306 291 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 TNFAIP3P21580 790 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 NOP14P78316 857 aaKnown RBP11.95□□□□□ -0.5
PDPN-202ENST00000376057 ARID5AQ03989 594 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 PTK7Q13308 1070 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 BIRC3Q13489 604 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 ZBTB6Q15916 424 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 THNSL1Q8IYQ7 743 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 SLC35F6Q8N357 371 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 CPB2Q96IY4 423 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 SCLT1Q96NL6 688 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 NOX5Q96PH1 765 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDPN-202ENST00000376057 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 APOBEC3GQ9HC16 384 aaKnown RBP11.95□□□□□ -0.5
PDPN-202ENST00000376057 CNTN3Q9P232 1028 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
PDPN-202ENST00000376057 PGK1P00558 417 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 H2AFZP0C0S5 128 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 TMEM191BP0C7N4 346 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 CYP11B1P15538 503 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 CHRNB2P17787 502 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 AMPD2Q01433 879 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 H2AFVQ71UI9 128 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 ALS2CR12Q96Q35 445 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 BCO2Q9BYV7 579 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
PDPN-202ENST00000376057 NIF3L1Q9GZT8 377 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 FAM49AQ9H0Q0 323 aaPredicted RBP11.94□□□□□ -0.5
PDPN-202ENST00000376057 ANKRD62A6NC57 917 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 PHACTR2O75167 634 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 RTN2O75298 545 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 CAPN15O75808 1086 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 MTA2O94776 668 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 CXCL8P10145 99 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 ELNP15502 786 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 GDF6Q6KF10 455 aaPredicted RBP11.94□□□□□ -0.5
PDPN-202ENST00000376057 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 ZNF592Q92610 1267 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 KAT5Q92993 513 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 SNX27Q96L92 541 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
PDPN-202ENST00000376057 MTMR12Q9C0I1 747 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 CYP3A43Q9HB55 503 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
PDPN-202ENST00000376057 M0QZ92 97 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 CST3P01034 146 aaPredicted RBP11.93□□□□□ -0.5
PDPN-202ENST00000376057 HARSP12081 509 aaKnown RBP11.93□□□□□ -0.5
PDPN-202ENST00000376057 KCNE1P15382 129 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 CYP3A5P20815 502 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 PDE6CP51160 858 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 SEZ6Q53EL9 994 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 LHX8Q68G74 356 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 NOP9Q86U38 636 aaKnown RBP11.93□□□□□ -0.5
PDPN-202ENST00000376057 OSMRQ99650 979 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 TRIM10Q9UDY6 481 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 CDC23Q9UJX2 597 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 TRIP12Q14669 1992 aaPredicted RBP11.93□□□□□ -0.5
PDPN-202ENST00000376057 GRIN2DO15399 1336 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 CITO14578 2027 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 CES2O00748 559 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 SLU7O95391 586 aaKnown RBP11.93□□□□□ -0.5
PDPN-202ENST00000376057 ZNF200P98182 395 aaPredicted RBP11.93□□□□□ -0.5
PDPN-202ENST00000376057 TRPC3Q13507 836 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 TMEM132DQ14C87 1099 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 WHAMMP3Q1A5X7 153 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 JADE1Q6IE81 842 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 SLFN11Q7Z7L1 901 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 USP38Q8NB14 1042 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 SIX4Q9UIU6 781 aa11.93□□□□□ -0.5
PDPN-202ENST00000376057 CYP26A1O43174 497 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 SGPL1O95470 568 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 FAM163BP0C2L3 166 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 ACLYP53396 1101 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 FMO1Q01740 532 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 LMBRD2Q68DH5 695 aaPredicted RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 GLYCTKQ8IVS8 523 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 CEP120Q8N960 986 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 C1orf127Q8N9H9 656 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 ZNF296Q8WUU4 475 aaPredicted RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 TMEM40Q8WWA1 233 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 ZNF668Q96K58 619 aaPredicted RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 PI4K2AQ9BTU6 479 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 HMX1Q9NP08 348 aaPredicted RBP11.92□□□□□ -0.5
PDPN-202ENST00000376057 PHF24Q9UPV7 400 aa11.92□□□□□ -0.5
PDPN-202ENST00000376057 DUSP10Q9Y6W6 482 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms