RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 ECHDC2Q86YB7 292 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 SLC25A41Q8N5S1 370 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 IFT74Q96LB3 600 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 LRRC37BQ96QE4 947 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 CALN1Q9BXU9 219 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 PARP2Q9UGN5 583 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 GINS2Q9Y248 185 aa12.52□□□□□ -0.4
MCF2L-202ENST00000375597 UMODL1Q5DID0 1318 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 IGLV3-22A0A075B6J6 115 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 MIF4GDA9UHW6 222 aaKnown RBP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 PSMD10O75832 226 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 CCNHP51946 323 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 ORC2Q13416 577 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 TXNRD3NBQ6F5E7 133 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 EMC1Q8N766 993 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 MCEEQ96PE7 176 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 YY1AP1Q9H869 796 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 RAB20Q9NX57 234 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 KRT4P19013 534 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 SMARCA1P28370 1054 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 MAGEA4P43358 317 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 SEMA3FQ13275 785 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 BRDTQ58F21 947 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 HYIQ5T013 277 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 ANKS1BQ7Z6G8 1248 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 YTHDF3Q7Z739 585 aaKnown RBP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 MTDHQ86UE4 582 aaKnown RBP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 FBXL13Q8NEE6 735 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 HSPH1Q92598 858 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 SLC13A1Q9BZW2 595 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 KDM4CQ9H3R0 1056 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 AAASQ9NRG9 546 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 ZNF277Q9NRM2 450 aaPredicted RBP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 OLFML3Q9NRN5 406 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 GTF3C4Q9UKN8 822 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 G3BP2Q9UN86 482 aaKnown RBP12.52□□□□□ -0.41
MCF2L-202ENST00000375597 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.41
MCF2L-202ENST00000375597 F7P08709 466 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-202ENST00000375597 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
MCF2L-202ENST00000375597 RARRES1P49788 294 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 IL9RQ01113 521 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 XRCC4Q13426 336 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 KRT39Q6A163 491 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 RMDN3Q96TC7 470 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 OSBPL8Q9BZF1 889 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 PHTF1Q9UMS5 762 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 MRPL42Q9Y6G3 142 aaKnown RBP12.51□□□□□ -0.41
MCF2L-202ENST00000375597 LTBP4Q8N2S1 1624 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 F8VP50 259 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 TTC4O95801 387 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
MCF2L-202ENST00000375597 YWHAGP61981 247 aaKnown RBP eCLIP12.51□□□□□ -0.41
MCF2L-202ENST00000375597 LVRNQ6Q4G3 990 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 RHPN2Q8IUC4 686 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 DDX50Q9BQ39 737 aaKnown RBP12.51□□□□□ -0.41
MCF2L-202ENST00000375597 GLT8D2Q9H1C3 349 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 WNT8AQ9H1J5 351 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 FBXO6Q9NRD1 293 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-202ENST00000375597 C15orf41Q9Y2V0 281 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 NEU2Q9Y3R4 380 aa12.51□□□□□ -0.41
MCF2L-202ENST00000375597 PECAM1P16284 738 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 ADRA1DP25100 572 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 ATXN3P54252 364 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 SPP2Q13103 211 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 PPP2R5DQ14738 602 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 DLGAP5Q15398 846 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 Q4G0T1 1027 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 TAF1BQ53T94 588 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 ANKRD20A2Q5SQ80 823 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 ANKRD20A1Q5TYW2 823 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 ANKRD20A3Q5VUR7 823 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 MIS18BP1Q6P0N0 1132 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 VPS52Q8N1B4 723 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 BSNDQ8WZ55 320 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 CNKSR1Q969H4 720 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 MCUR1Q96AQ8 359 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 ZNF570Q96NI8 536 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 POLR3CQ9BUI4 534 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 NYAP2Q9P242 653 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 CHMP2BQ9UQN3 213 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 MYH11P35749 1972 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 A0A0A6YYK5 440 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-202ENST00000375597 NPTX2P47972 431 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 PEX5P50542 639 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 POLE2P56282 527 aa12.5□□□□□ -0.41
MCF2L-202ENST00000375597 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms