RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ITGA4P13612 1032 aa19.02■□□□□ 0.63
PTPDC1-202ENST00000375360 EPHB1P54762 984 aa19.02■□□□□ 0.63
PTPDC1-202ENST00000375360 RPS6KA2Q15349 733 aa19.02■□□□□ 0.63
PTPDC1-202ENST00000375360 VSIG10LQ86VR7 867 aa19.02■□□□□ 0.63
PTPDC1-202ENST00000375360 AFAP1L2Q8N4X5 818 aa19.02■□□□□ 0.63
PTPDC1-202ENST00000375360 ZBTB45Q96K62 511 aaPredicted RBP19.02■□□□□ 0.63
PTPDC1-202ENST00000375360 SPON2Q9BUD6 331 aa19.02■□□□□ 0.63
PTPDC1-202ENST00000375360 ANKRD65E5RJM6 399 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 ARL4CP56559 192 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 CDC42EP1Q00587 391 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 TSTA3Q13630 321 aaPredicted RBP19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 KYAT1Q16773 422 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 NLGN2Q8NFZ4 835 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 COPS5Q92905 334 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 FBXL5Q9UKA1 691 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 AKAP12Q02952 1782 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 P4HA2O15460 535 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 CIB2O75838 187 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 THPOP40225 353 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 NOTUMQ6P988 496 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 PDCD6IPQ8WUM4 868 aaKnown RBP19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 CELF4Q9BZC1 486 aaKnown RBP19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 PEX10O60683 326 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 PPP1R11O60927 126 aaPredicted RBP19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 TMEM253P0C7T8 217 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 MUTP22033 750 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 KRT17Q04695 432 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 PPATQ06203 517 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 AP1B1Q10567 949 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 GRID2IPA4D2P6 1211 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 XPAP23025 273 aaPredicted RBP19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 ARSEP51690 589 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 CUL2Q13617 745 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 HEATR6Q6AI08 1181 aaKnown RBP19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 SH3BP5LQ7L8J4 393 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 CCDC60Q8IWA6 550 aaPredicted RBP19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 SENP7Q9BQF6 1050 aa19.01■□□□□ 0.63
PTPDC1-202ENST00000375360 RGS2P41220 211 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 CPT1AP50416 773 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 EIF3BP55884 814 aaKnown RBP19■□□□□ 0.63
PTPDC1-202ENST00000375360 EFHC2Q5JST6 749 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 MYLK4Q86YV6 388 aaPredicted RBP19■□□□□ 0.63
PTPDC1-202ENST00000375360 FBXO41Q8TF61 875 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 KCNMB3Q9NPA1 279 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 TGFB3P10600 412 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 MAGOHP61326 146 aaKnown RBP19■□□□□ 0.63
PTPDC1-202ENST00000375360 LAMTOR4Q0VGL1 99 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 THOC5Q13769 683 aaKnown RBP19■□□□□ 0.63
PTPDC1-202ENST00000375360 IZUMO3Q5VZ72 239 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 BTBD8Q5XKL5 378 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 CATSPERGQ6ZRH7 1159 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 TATDN2Q93075 761 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 TADA2AO75478 443 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 GRIK1P39086 918 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 PMS2P54278 862 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 GJC2Q5T442 439 aaPredicted RBP19■□□□□ 0.63
PTPDC1-202ENST00000375360 C6orf118Q5T5N4 469 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 ZNF571Q7Z3V5 609 aaPredicted RBP19■□□□□ 0.63
PTPDC1-202ENST00000375360 ZBED8Q8IZ13 594 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 TLK1Q9UKI8 766 aa19■□□□□ 0.63
PTPDC1-202ENST00000375360 SLC12A3P55017 1021 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 MYL6P60660 151 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 SNRPFP62306 86 aaKnown RBP18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 TMEM132BQ14DG7 1078 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 SAMD3Q8N6K7 520 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 SLC20A1Q8WUM9 679 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 RIN2Q8WYP3 895 aaPredicted RBP18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 CYP39A1Q9NYL5 469 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 B3GAT3O94766 335 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 IL18RAPO95256 599 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 ADCYAP1R1P41586 468 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 PDIA2Q13087 525 aaKnown RBP18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 ZNF507Q8TCN5 953 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 ATP8B4Q8TF62 1192 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 OSGEPQ9NPF4 335 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 RNF19AQ9NV58 838 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 FIS1Q9Y3D6 152 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 ATRNO75882 1429 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 ERVK-9P63128 1117 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 SREBF2Q12772 1141 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 NUGGCQ68CJ6 796 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 PPM1NQ8N819 430 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 MORC4Q8TE76 937 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 SLC35C1Q96A29 364 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 RASA4BC9J798 803 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 RASA4O43374 803 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 CXCL8P10145 99 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 YY1P25490 414 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 CCDC38Q502W7 563 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 LRRC31Q6UY01 552 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 PID1Q7Z2X4 250 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 KDELC2Q7Z4H8 507 aa18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 IPO11Q9UI26 975 aaKnown RBP18.99■□□□□ 0.63
PTPDC1-202ENST00000375360 GAS2O43903 313 aaKnown RBP18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 PSMD10O75832 226 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 GARTP22102 1010 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 OR1G1P47890 313 aa18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 EIF3EP60228 445 aaKnown RBP18.98■□□□□ 0.63
PTPDC1-202ENST00000375360 TRAPPC11Q7Z392 1133 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms