RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SUFUQ9UMX1 484 aa12.18□□□□□ -0.46
PTCH1-203ENST00000375274 F5H423 210 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-203ENST00000375274 CAND2O75155 1236 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 FDX1P10109 184 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 RARGP13631 454 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 CASP4P49662 377 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 ACTR2P61160 394 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 SMAD1Q15797 465 aaKnown RBP12.17□□□□□ -0.46
PTCH1-203ENST00000375274 KIF19Q2TAC6 998 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 RWDD4Q6NW29 188 aaKnown RBP12.17□□□□□ -0.46
PTCH1-203ENST00000375274 C3orf62Q6ZUJ4 267 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 KLF6Q99612 283 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-203ENST00000375274 TMEM8AQ9HCN3 771 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 CREB3O43889 395 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 CHEK2O96017 543 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 SERPINB4P48594 390 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 EXT2Q93063 718 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 POLR3CQ9BUI4 534 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-203ENST00000375274 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 SLC12A6Q9UHW9 1150 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 STAP1Q9ULZ2 295 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 ENO4A6NNW6 628 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 RSPH10B2B2RC85 870 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 RSPH10BP0C881 870 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 STMN1P16949 149 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 PAMP19021 973 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 SCTRP47872 440 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 MTM1Q13496 603 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 EPC2Q52LR7 807 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 CDC42EP5Q6NZY7 148 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 RNF139Q8WU17 664 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 RIT2Q99578 217 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 ADA2Q9NZK5 511 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 MARCOQ9UEW3 520 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-203ENST00000375274 SUN2Q9UH99 717 aa12.17□□□□□ -0.46
PTCH1-203ENST00000375274 RNF103-CHMP3A0A140T963 221 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 FAM237AA0A1B0GTK4 181 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 NVLO15381 856 aaKnown RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 MED24O75448 989 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 RALAP11233 206 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 NCOA4Q13772 614 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 PIGHQ14442 188 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 ZNF571Q7Z3V5 609 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 EPS8L3Q8TE67 593 aaKnown RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 DNAJC9Q8WXX5 260 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 ACAP3Q96P50 834 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 MCEEQ96PE7 176 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 TRPV6Q9H1D0 765 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 VCPKMTQ9H867 229 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 WDR35Q9P2L0 1181 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 ZC3H7BQ9UGR2 993 aaKnown RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 SLIT1O75093 1534 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 TCRBV5S4A2TA0A5A2 114 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 OSBPP22059 807 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 KLRK1P26718 216 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 CIITAP33076 1130 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 ALDH18A1P54886 795 aaKnown RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 CENPCQ03188 943 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 XKR3Q5GH77 459 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 SYCP2LQ5T4T6 812 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 KIAA0895Q8NCT3 520 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 SCG3Q8WXD2 468 aaKnown RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 MTBPQ96DY7 904 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 JPH1Q9HDC5 661 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 MRPL40Q9NQ50 206 aaKnown RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 CHMP2BQ9UQN3 213 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 SLC4A7Q9Y6M7 1214 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 DEPDC5O75140 1603 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 KCNN4O15554 427 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 RBP3P10745 1247 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 BMP6P22004 513 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 EFNA5P52803 228 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 NPEPPSP55786 919 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 ZNF200P98182 395 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 DNAL1Q4LDG9 190 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 SCFD1Q8WVM8 642 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 WRNIP1Q96S55 665 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 DUSP9Q99956 384 aaKnown RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 OSGEPQ9NPF4 335 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 ARHGAP10A1A4S6 786 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 HLA-DRAP01903 254 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 SESN2P58004 480 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-203ENST00000375274 POU5F1BQ06416 359 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 STX3Q13277 289 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 CUL3Q13618 768 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 PRR5LQ6MZQ0 368 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 AGR3Q8TD06 166 aa12.16□□□□□ -0.46
PTCH1-203ENST00000375274 GSTA4O15217 222 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 AKAP3O75969 853 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 ZFXP17010 805 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-203ENST00000375274 PAPOLAP51003 745 aaKnown RBP12.15□□□□□ -0.46
PTCH1-203ENST00000375274 MED21Q13503 144 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 ITPK1Q13572 414 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 MDH1BQ5I0G3 518 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.46
PTCH1-203ENST00000375274 HHIPL2Q6UWX4 724 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 BTNL9Q6UXG8 535 aa12.15□□□□□ -0.46
PTCH1-203ENST00000375274 PID1Q7Z2X4 250 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms