RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 SRGAP1Q7Z6B7 1085 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 LRRC3BQ96PB8 259 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 MAP3K14Q99558 947 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 LZTS2Q9BRK4 669 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 DSCC1Q9BVC3 393 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 NIFKQ9BYG3 293 aaKnown RBP11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 TPSD1Q9BZJ3 242 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 RIC8AQ9NPQ8 531 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 DISC1Q9NRI5 854 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 TMEM74BQ9NUR3 256 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 KLK14Q9P0G3 267 aa11.21□□□□□ -0.61
HLA-DRA-201ENST00000374982 USP9XQ93008 2570 aaPredicted RBP11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 CAPN8A6NHC0 703 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 OPHN1O60890 802 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 MAFO75444 373 aaPredicted RBP11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 NTRK1P04629 796 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 ITPKBP27987 946 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 ELF1P32519 619 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 ATXN3P54252 364 aaPredicted RBP11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 ROR1Q01973 937 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 GRSF1Q12849 480 aaKnown RBP eCLIP11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 ELAVL2Q12926 359 aaKnown RBP11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 TUSC3Q13454 348 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 ARHGAP29Q52LW3 1261 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 USP39Q53GS9 565 aaKnown RBP11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 PCSK4Q6UW60 755 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 HAUS6Q7Z4H7 955 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 TMEFF1Q8IYR6 380 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 ZNF654Q8IZM8 581 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 CPB2Q96IY4 423 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 GTPBP2Q9BX10 602 aaKnown RBP11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 COL4A3BPQ9Y5P4 624 aa11.2□□□□□ -0.62
HLA-DRA-201ENST00000374982 ATXN2Q99700 1313 aaKnown RBP11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 TSPAN1O60635 241 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 DDAH1O94760 285 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 ERLIN2O94905 339 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 STBD1O95210 358 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SEC24AO95486 1093 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 EGFP01133 1207 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 CFIP05156 583 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SRGAP2CP0DJJ0 459 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SDSP20132 328 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 FGFR3P22607 806 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SETQ01105 290 aaPredicted RBP11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 TRDNQ13061 729 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 DMC1Q14565 340 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 MAPK6Q16659 721 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SLC23A3Q6PIS1 610 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 TOGARAM2Q6ZUX3 1019 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 ARMCX6Q7L4S7 300 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SYT13Q7L8C5 426 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SYT12Q8IV01 421 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 OR2I1PQ8NGU4 316 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 ZNF461Q8TAF7 563 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SHKBP1Q8TBC3 707 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 CHFRQ96EP1 664 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 FCRL3Q96P31 734 aaPredicted RBP11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 GPR88Q9GZN0 384 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 INSL5Q9Y5Q6 135 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 SPTA1P02549 2419 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 PLXND1Q9Y4D7 1925 aa11.19□□□□□ -0.62
HLA-DRA-201ENST00000374982 ZMYM2Q9UBW7 1377 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 HELZP42694 1942 aaKnown RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 CHMP2AO43633 222 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 SH3BP5O60239 455 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 ABLIM3O94929 683 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 CLK2P49760 499 aaKnown RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 PDE1AP54750 535 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 EPHA5P54756 1037 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 AP3B2Q13367 1082 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 ITPRIPL2Q3MIP1 535 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 XKR3Q5GH77 459 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 WWC2Q6AWC2 1192 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 IQCEQ6IPM2 695 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 NOTUMQ6P988 496 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 CWC27Q6UX04 472 aaKnown RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 MARCH9Q86YJ5 346 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 ARID3BQ8IVW6 561 aaPredicted RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 TCEAL8Q8IYN2 117 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 HACE1Q8IYU2 909 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 ELMOD1Q8N336 334 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 MINDY1Q8N5J2 469 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 FAM181AQ8N9Y4 354 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 DAGLBQ8NCG7 672 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 RPLP0P6Q8NHW5 317 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 CRYGNQ8WXF5 182 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 RILPL2Q969X0 211 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 TRIM6Q9C030 488 aaPredicted RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 CYP4F11Q9HBI6 524 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 POLMQ9NP87 494 aaPredicted RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 ASAH2Q9NR71 780 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 CEP72Q9P209 647 aa11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 APOBEC2Q9Y235 224 aaKnown RBP11.18□□□□□ -0.62
HLA-DRA-201ENST00000374982 PCDHB9Q9Y5E1 797 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms