RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 PPP2R3CQ969Q6 453 aa13.3□□□□□ -0.28
HLA-DQA2-210ENST00000374940 DHTKD1Q96HY7 919 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQA2-210ENST00000374940 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
HLA-DQA2-210ENST00000374940 ZBP1Q9H171 429 aa13.3□□□□□ -0.28
HLA-DQA2-210ENST00000374940 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
HLA-DQA2-210ENST00000374940 ENTPD7Q9NQZ7 604 aa13.3□□□□□ -0.28
HLA-DQA2-210ENST00000374940 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.28
HLA-DQA2-210ENST00000374940 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 PSMA7O14818 248 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 FSCN2O14926 492 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 TRAPPC3O43617 180 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CSPG5O95196 566 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CTSAP10619 480 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 NR2F2P24468 414 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 IRS1P35568 1242 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 WNT7BP56706 349 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 ADAM9Q13443 819 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 EFCAB13Q8IY85 973 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 RNF168Q8IYW5 571 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 HASPINQ8TF76 798 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CACTINQ8WUQ7 758 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 MFSD14AQ96MC6 490 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 TSG101Q99816 390 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 HERC2P3Q9BVR0 1158 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 VN1R3Q9BXE9 311 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 PDE11AQ9HCR9 933 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 FRMD4BQ9Y2L6 1034 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CITO14578 2027 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 PLXNA4Q9HCM2 1894 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CCNE1P24864 410 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 TFAMQ00059 246 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 LRRC63Q05C16 580 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CYP24A1Q07973 514 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 PSMD6Q15008 389 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 USP41Q3LFD5 358 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 PLPP4Q5VZY2 271 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 MAFAQ8NHW3 353 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 FNBP1Q96RU3 617 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 GPR62Q9BZJ7 368 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 DPP3Q9NY33 737 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 SSX2IPQ9Y2D8 614 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 NUB1Q9Y5A7 615 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 IRAK3Q9Y616 596 aa13.29□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CETN3O15182 167 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 MAPK13O15264 365 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CXCL14O95715 111 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 URODP06132 367 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 PAX3P23760 479 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CASP4P49662 377 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 GUCY2FP51841 1108 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 DUOXA2Q1HG44 320 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 TCEAL5Q5H9L2 206 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 C9orf57Q5W0N0 161 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CEP135Q66GS9 1140 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 ANKRD40Q6AI12 368 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CD300LGQ6UXG3 332 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 TAS1R1Q7RTX1 841 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 WDR49Q8IV35 697 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 GPR65Q8IYL9 337 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 C3orf58Q8NDZ4 430 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CCDC127Q96BQ5 260 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 MRPL17Q9NRX2 175 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 CHST7Q9NS84 486 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 INTS13Q9NVM9 706 aa13.28□□□□□ -0.28
HLA-DQA2-210ENST00000374940 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 C2orf71A6NGG8 1288 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 HIDE1A8MVS5 230 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 PIRO00625 290 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 TMEM191BP0C7N4 346 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 TNNI1P19237 187 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 PTMSP20962 102 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 IGFBP6P24592 240 aaPredicted RBP13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 CA8P35219 290 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 PSMC2P35998 433 aaKnown RBP13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 GLUD2P49448 558 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 FKBP3Q00688 224 aaKnown RBP13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 DSG1Q02413 1049 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 PTPN14Q15678 1187 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 FAM171A1Q5VUB5 890 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 FOXR2Q6PJQ5 311 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 USP37Q86T82 979 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 PPM1EQ8WY54 764 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 ANKRD36BP1Q96IX9 119 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 CGRRF1Q99675 332 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 MKNK1Q9BUB5 465 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 PCDHGC5Q9Y5F6 944 aa13.27□□□□□ -0.29
HLA-DQA2-210ENST00000374940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.26□□□□□ -0.29
HLA-DQA2-210ENST00000374940 BICDL2A1A5D9 508 aa13.26□□□□□ -0.29
HLA-DQA2-210ENST00000374940 FSD2A1L4K1 749 aa13.26□□□□□ -0.29
HLA-DQA2-210ENST00000374940 NCK2O43639 380 aa13.26□□□□□ -0.29
HLA-DQA2-210ENST00000374940 LILRB3O75022 631 aa13.26□□□□□ -0.29
HLA-DQA2-210ENST00000374940 AKAP3O75969 853 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms