RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 NRAPQ86VF7 1730 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 DOT1LQ8TEK3 1739 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 LRP5O75197 1615 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 SH3TC1Q8TE82 1336 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 A0A0D9SFI3 127 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 UBA6A0AVT1 1052 aaPredicted RBP5.6□□□□□ -1.51
USP48-202ENST00000374730 CBX4O00257 560 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 SLC26A4O43511 780 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 ACO1P21399 889 aaKnown RBP5.6□□□□□ -1.51
USP48-202ENST00000374730 PSMA5P28066 241 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 ANKRD1Q15327 319 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 EPHA7Q15375 998 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 ZNF174Q15697 407 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 CCDC144BQ3MJ40 725 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 PIK3R6Q5UE93 754 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 EGFLAMQ63HQ2 1017 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 SDE2Q6IQ49 451 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 CAVIN1Q6NZI2 390 aaKnown RBP5.6□□□□□ -1.51
USP48-202ENST00000374730 KLHDC10Q6PID8 442 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 RNF207Q6ZRF8 634 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 Q6ZSN1 163 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 UBE2R2Q712K3 238 aaPredicted RBP5.6□□□□□ -1.51
USP48-202ENST00000374730 NOL8Q76FK4 1167 aaKnown RBP5.6□□□□□ -1.51
USP48-202ENST00000374730 Q8N1X5 172 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 CCDC191Q8NCU4 936 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 OR14K1Q8NGZ2 314 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 KLHDC4Q8TBB5 520 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 SYAP1Q96A49 352 aaPredicted RBP5.6□□□□□ -1.51
USP48-202ENST00000374730 MAML3Q96JK9 1138 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 C16orf92Q96LL3 132 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 FAM227BQ96M60 508 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 SIL1Q9H173 461 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 PDRG1Q9NUG6 133 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 MAGEC2Q9UBF1 373 aaPredicted RBP5.6□□□□□ -1.51
USP48-202ENST00000374730 FAM184BQ9ULE4 1060 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 SMC3Q9UQE7 1217 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 AKAP11Q9UKA4 1901 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 PHLPP1O60346 1717 aa5.6□□□□□ -1.51
USP48-202ENST00000374730 ABCC12Q96J65 1359 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 PPP1R12AO14974 1030 aaPredicted RBP5.59□□□□□ -1.51
USP48-202ENST00000374730 STX6O43752 255 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 FZD7O75084 574 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 TAF5LO75529 589 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 CIAO1O76071 339 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 ASMTLO95671 621 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 SYT1P21579 422 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 IL15P40933 162 aaPredicted RBP5.59□□□□□ -1.51
USP48-202ENST00000374730 GDF5P43026 501 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 SLC6A3Q01959 620 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 ST3GAL1Q11201 340 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 TFCP2Q12800 502 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.51
USP48-202ENST00000374730 KRT32Q14532 448 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 TCEA2Q15560 299 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 ADCK5Q3MIX3 580 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 TTC38Q5R3I4 469 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 CDCA2Q69YH5 1023 aaPredicted RBP5.59□□□□□ -1.51
USP48-202ENST00000374730 SLFN12LQ6IEE8 588 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 KIAA1958Q8N8K9 716 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 SLC16A11Q8NCK7 471 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 SHCBP1Q8NEM2 672 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 OR5AN1Q8NGI8 311 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 ANP32BQ92688 251 aaKnown RBP5.59□□□□□ -1.51
USP48-202ENST00000374730 GFM2Q969S9 779 aaKnown RBP5.59□□□□□ -1.51
USP48-202ENST00000374730 ISCA1Q9BUE6 129 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 TEX13AQ9BXU3 409 aaPredicted RBP5.59□□□□□ -1.51
USP48-202ENST00000374730 BOLA2Q9H3K6 86 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 RRAGDQ9NQL2 400 aaPredicted RBP5.59□□□□□ -1.51
USP48-202ENST00000374730 KCMF1Q9P0J7 381 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 SAE1Q9UBE0 346 aaPredicted RBP5.59□□□□□ -1.51
USP48-202ENST00000374730 ATP6V1DQ9Y5K8 247 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 NWD2Q9ULI1 1742 aa5.59□□□□□ -1.51
USP48-202ENST00000374730 ROBO1Q9Y6N7 1651 aa5.59□□□□□ -1.52
USP48-202ENST00000374730 DOCK2Q92608 1830 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 ZNF335Q9H4Z2 1342 aaPredicted RBP5.58□□□□□ -1.52
USP48-202ENST00000374730 EYA2O00167 538 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 CYR61O00622 381 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 H2AFYO75367 372 aaKnown RBP5.58□□□□□ -1.52
USP48-202ENST00000374730 LARGE1O95461 756 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 JMJD7P0C870 316 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 RPS6KB1P23443 525 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 ACVRL1P37023 503 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 KCNJ4P48050 445 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 PIP4K2AP48426 406 aaPredicted RBP5.58□□□□□ -1.52
USP48-202ENST00000374730 ADCY1Q08828 1119 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 DGKDQ16760 1214 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 ME3Q16798 604 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 MIIPQ5JXC2 388 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 BLOC1S2Q6QNY1 142 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 LMBR1LQ6UX01 489 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 USP51Q70EK9 711 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 ATG9AQ7Z3C6 839 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 ADGRE4PQ86SQ3 457 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 ZNF589Q86UQ0 364 aaPredicted RBP5.58□□□□□ -1.52
USP48-202ENST00000374730 KIF18BQ86Y91 864 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 CCDC83Q8IWF9 413 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 GPR135Q8IZ08 494 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 KBTBD3Q8NAB2 608 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 RABGGTAQ92696 567 aa5.58□□□□□ -1.52
USP48-202ENST00000374730 SLC7A6OSQ96CW6 309 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms