RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ORC1Q13415 861 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 EIF1ADQ8N9N8 165 aaKnown RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 NTPCRQ9BSD7 190 aaKnown RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 TXLNGYQ9BZA5 131 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 ACAD9Q9H845 621 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 PASKQ96RG2 1323 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 GOLGA6L7A0A1B0GV03 622 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 TRAPPC3O43617 180 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 VIMP08670 466 aaKnown RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 GNA15P30679 374 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 RPL7AP62424 266 aaKnown RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 MIS18BP1Q6P0N0 1132 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 USP37Q86T82 979 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 SAMD3Q8N6K7 520 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 TMC2Q8TDI7 906 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 PSPC1Q8WXF1 523 aaKnown RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 PRMT1Q99873 361 aaKnown RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 KCNK9Q9NPC2 374 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 GGA3Q9NZ52 723 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 PCYOX1Q9UHG3 505 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 MYPNQ86TC9 1320 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 PODXLO00592 558 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 RASGRF2O14827 1237 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 ECM2O94769 699 aaPredicted RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 ATF7P17544 494 aaPredicted RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 ADCY2Q08462 1091 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 AGBL2Q5U5Z8 902 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 CRELD2Q6UXH1 353 aaPredicted RBP18.19■□□□□ 0.5
RXRB-201ENST00000374680 GSTA5Q7RTV2 222 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 NCAPG2Q86XI2 1143 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 C9orf72Q96LT7 481 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 FBXL18Q96ME1 805 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 UVRAGQ9P2Y5 699 aa18.19■□□□□ 0.5
RXRB-201ENST00000374680 EXTL3O43909 919 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 WEE2P0C1S8 567 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 GNPTABQ3T906 1256 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 XKR3Q5GH77 459 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 HOOK3Q86VS8 718 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 SLC7A3Q8WY07 619 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 SEC16BQ96JE7 1060 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 CDC42EP4Q9H3Q1 356 aaKnown RBP18.18■□□□□ 0.5
RXRB-201ENST00000374680 C10orf88Q9H8K7 445 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 RGS17Q9UGC6 210 aaPredicted RBP18.18■□□□□ 0.5
RXRB-201ENST00000374680 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 RIPK2O43353 540 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 SUPT20HL2P0C7V6 817 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 UNGP13051 313 aaPredicted RBP18.18■□□□□ 0.5
RXRB-201ENST00000374680 ITGA8P53708 1063 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 HADHBP55084 474 aaKnown RBP18.18■□□□□ 0.5
RXRB-201ENST00000374680 PPP2R5EQ16537 467 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 TMEM132AQ24JP5 1023 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 SUPT20HL1Q3ZLR7 823 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 TREML2Q5T2D2 321 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 DCAF15Q66K64 600 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 REPS2Q8NFH8 660 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 ARHGAP28Q9P2N2 729 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 PCDHB2Q9Y5E7 798 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 DNAH12Q6ZR08 3092 aa18.18■□□□□ 0.5
RXRB-201ENST00000374680 ZSCAN5DPP0CG00 497 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 LY6KQ17RY6 165 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 CYP4F22Q6NT55 531 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 DPH6Q7L8W6 267 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 TRAPPC12Q8WVT3 735 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 TIPINQ9BVW5 301 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 AS3MTQ9HBK9 375 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 SPDYE16A6NNV3 312 aaPredicted RBP18.17■□□□□ 0.5
RXRB-201ENST00000374680 TLR3O15455 904 aaKnown RBP18.17■□□□□ 0.5
RXRB-201ENST00000374680 PIAS1O75925 651 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 C4BPAP04003 597 aaKnown RBP18.17■□□□□ 0.5
RXRB-201ENST00000374680 ZACNQ401N2 412 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 THNSL1Q8IYQ7 743 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 RBBP8NLQ8NC74 664 aaPredicted RBP18.17■□□□□ 0.5
RXRB-201ENST00000374680 SCLT1Q96NL6 688 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 XPO6Q96QU8 1125 aaKnown RBP18.17■□□□□ 0.5
RXRB-201ENST00000374680 PDLIM7Q9NR12 457 aa18.17■□□□□ 0.5
RXRB-201ENST00000374680 INTS9Q9NV88 658 aaKnown RBP18.17■□□□□ 0.5
RXRB-201ENST00000374680 GSTTP1A0A1W2PQM5 241 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 A6NNZ2 444 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 PGK2P07205 417 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 ETS1P14921 441 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 ZNF280AP59817 542 aaPredicted RBP18.16■□□□□ 0.5
RXRB-201ENST00000374680 NOP14P78316 857 aaKnown RBP18.16■□□□□ 0.5
RXRB-201ENST00000374680 STXBP2Q15833 593 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 TUBB8Q3ZCM7 444 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 CCDC121Q6ZUS5 278 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 GDAP1Q8TB36 358 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 DYDC1Q8WWB3 177 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 ELAC2Q9BQ52 826 aaKnown RBP18.16■□□□□ 0.5
RXRB-201ENST00000374680 CEP350Q5VT06 3117 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 MAPK13O15264 365 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 BRD2P25440 801 aaKnown RBP18.16■□□□□ 0.5
RXRB-201ENST00000374680 CUL2Q13617 745 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 TMEM63BQ5T3F8 832 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 CYP4A22Q5TCH4 519 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 VTI1AQ96AJ9 217 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 SPATA31C2B4DYI2 1134 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 OATP04181 439 aa18.16■□□□□ 0.5
RXRB-201ENST00000374680 GARTP22102 1010 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms