RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CACTINQ8WUQ7 758 aaKnown RBP16.26■□□□□ 0.19
HSPG2-201ENST00000374673 IGSF21Q96ID5 467 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 COLEC11Q9BWP8 271 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 GZF1Q9H116 711 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-201ENST00000374673 INTS13Q9NVM9 706 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 CACNG4Q9UBN1 327 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 PRG3Q9Y2Y8 225 aaPredicted RBP16.26■□□□□ 0.19
HSPG2-201ENST00000374673 PTPRJQ12913 1337 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 EPOPA6NHQ4 379 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 PODXLO00592 558 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 ITGB1P05556 798 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 DLATP10515 647 aaKnown RBP16.25■□□□□ 0.19
HSPG2-201ENST00000374673 TFAMQ00059 246 aaKnown RBP16.25■□□□□ 0.19
HSPG2-201ENST00000374673 UBE3AQ05086 875 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 BFSP1Q12934 665 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 GPM6BQ13491 265 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 DCLRE1AQ6PJP8 1040 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 USP37Q86T82 979 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 TMEM173Q86WV6 379 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-201ENST00000374673 BCL7CQ8WUZ0 217 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-201ENST00000374673 CCDC127Q96BQ5 260 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 EEF2KMTQ96G04 330 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 BORCS6Q96GS4 357 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 TMEM169Q96HH4 297 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 ANKRD36BP1Q96IX9 119 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 FUCA2Q9BTY2 467 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 LZTS1Q9Y250 596 aa16.25■□□□□ 0.19
HSPG2-201ENST00000374673 ANO9A1A5B4 782 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 SYCE3A1L190 88 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 LRRIQ3A6PVS8 624 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-201ENST00000374673 KIF4AO95239 1232 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 FGFR1OPO95684 399 aaKnown RBP16.24■□□□□ 0.19
HSPG2-201ENST00000374673 EFEMP2O95967 443 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 TMEM191BP0C7N4 346 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 KRT13P13646 458 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 TNNI1P19237 187 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 VAMP7P51809 220 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 GUCY2FP51841 1108 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 AP3M2P53677 418 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 KRT17Q04695 432 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 GRIN2CQ14957 1233 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 ZSCAN23Q3MJ62 389 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 LMBRD2Q68DH5 695 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-201ENST00000374673 C11orf57Q6ZUT1 292 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-201ENST00000374673 OR5B17Q8NGF7 314 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 SPPL3Q8TCT6 385 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 SRRTQ9BXP5 876 aaKnown RBP16.24■□□□□ 0.19
HSPG2-201ENST00000374673 MTMR12Q9C0I1 747 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 LMAN2LQ9H0V9 348 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 METTL14Q9HCE5 456 aaKnown RBP16.24■□□□□ 0.19
HSPG2-201ENST00000374673 DPP3Q9NY33 737 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 STK39Q9UEW8 545 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 ADAM28Q9UKQ2 775 aa16.24■□□□□ 0.19
HSPG2-201ENST00000374673 SCN1AP35498 2009 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 F8W810 466 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 PIRO00625 290 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 IKBKBO14920 756 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 LPXNO60711 386 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 GNA14O95837 355 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 TNNC2P02585 160 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 MARSP56192 900 aaKnown RBP16.23■□□□□ 0.19
HSPG2-201ENST00000374673 DLG4P78352 724 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 C9orf57Q5W0N0 161 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 CD300LGQ6UXG3 332 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 FRMD5Q7Z6J6 570 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 DDX53Q86TM3 631 aaKnown RBP16.23■□□□□ 0.19
HSPG2-201ENST00000374673 RNF168Q8IYW5 571 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-201ENST00000374673 TMEM130Q8N3G9 435 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 C1orf127Q8N9H9 656 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 C3orf58Q8NDZ4 430 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 CXorf38Q8TB03 319 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 ENOX1Q8TC92 643 aaKnown RBP16.23■□□□□ 0.19
HSPG2-201ENST00000374673 GDPD5Q8WTR4 605 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 ZNF516Q92618 1163 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 RABGGTAQ92696 567 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 POP1Q99575 1024 aaKnown RBP16.23■□□□□ 0.19
HSPG2-201ENST00000374673 DNAJC25Q9H1X3 360 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
HSPG2-201ENST00000374673 ITGA11Q9UKX5 1188 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 VWA8A3KMH1 1905 aa16.23■□□□□ 0.19
HSPG2-201ENST00000374673 RFXAPO00287 272 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 TULP1O00294 542 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-201ENST00000374673 GRM6O15303 877 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 B3GAT3O94766 335 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 CCDC40Q4G0X9 1142 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 C1orf220Q5T0J3 134 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 FUT10Q6P4F1 479 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 TRAPPC11Q7Z392 1133 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 POF1BQ8WVV4 589 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 FAM84AQ96KN4 292 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 PRDM12Q9H4Q4 367 aa16.22■□□□□ 0.19
HSPG2-201ENST00000374673 ARMCX3Q9UH62 379 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-201ENST00000374673 PUF60Q9UHX1 559 aaKnown RBP16.22■□□□□ 0.19
HSPG2-201ENST00000374673 SF3B1O75533 1304 aaKnown RBP eCLIP16.21■□□□□ 0.19
HSPG2-201ENST00000374673 LAMA2P24043 3122 aaKnown RBP16.21■□□□□ 0.19
HSPG2-201ENST00000374673 PPEF2O14830 753 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 TADA2AO75478 443 aa16.21■□□□□ 0.19
HSPG2-201ENST00000374673 C4BPAP04003 597 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms