RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SPATA1Q5VX52 437 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 KIAA1841Q6NSI8 718 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 ADGRD2Q7Z7M1 963 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 RBM23Q86U06 439 aaKnown RBP17.32■□□□□ 0.36
HDHD3-202ENST00000374180 NT5DC4Q86YG4 428 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 AUTS2Q8WXX7 1259 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 MAN1B1Q9UKM7 699 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 TRAF3IP3Q9Y228 551 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 HIDE1A8MVS5 230 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 TRAPPC3O43617 180 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 IGFBP6P24592 240 aaPredicted RBP17.31■□□□□ 0.36
HDHD3-202ENST00000374180 LRPAP1P30533 357 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 NRIP1P48552 1158 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 ELAVL2Q12926 359 aaKnown RBP17.31■□□□□ 0.36
HDHD3-202ENST00000374180 SURF1Q15526 300 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 USP41Q3LFD5 358 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 RNF168Q8IYW5 571 aaPredicted RBP17.31■□□□□ 0.36
HDHD3-202ENST00000374180 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
HDHD3-202ENST00000374180 HERC2P3Q9BVR0 1158 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 IGFLR1Q9H665 355 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 PDE11AQ9HCR9 933 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 MRPL17Q9NRX2 175 aaKnown RBP17.31■□□□□ 0.36
HDHD3-202ENST00000374180 KIAA1468Q9P260 1216 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 SSX2IPQ9Y2D8 614 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 SPTBN5Q9NRC6 3674 aaKnown RBP17.31■□□□□ 0.36
HDHD3-202ENST00000374180 XIRP2A4UGR9 3374 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.31■□□□□ 0.36
HDHD3-202ENST00000374180 C2orf71A6NGG8 1288 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 BIN1O00499 593 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 C2CD2LO14523 706 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 PER2O15055 1255 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 NCK2O43639 380 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 NR3C1P04150 777 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 URODP06132 367 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 GUCY2FP51841 1108 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 WNT7BP56706 349 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
HDHD3-202ENST00000374180 HYAL1Q12794 435 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 COBLL1Q53SF7 1204 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 FAM171A1Q5VUB5 890 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 SLC9A9Q8IVB4 645 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 EFCAB13Q8IY85 973 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 C3orf58Q8NDZ4 430 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 TMEM174Q8WUU8 243 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 CLSTN2Q9H4D0 955 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 CHST7Q9NS84 486 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 DPP3Q9NY33 737 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 IRAK3Q9Y616 596 aa17.31■□□□□ 0.36
HDHD3-202ENST00000374180 RPL13P26373 211 aaKnown RBP17.3■□□□□ 0.36
HDHD3-202ENST00000374180 GLUD2P49448 558 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 DSG1Q02413 1049 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 STIM1Q13586 685 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 MYBPC2Q14324 1141 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 PTPN14Q15678 1187 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 CD300LGQ6UXG3 332 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 CEP57Q86XR8 500 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 TMEM130Q8N3G9 435 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 B3GALT6Q96L58 329 aa17.3■□□□□ 0.36
HDHD3-202ENST00000374180 A0A0C4DFX4 3053 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
HDHD3-202ENST00000374180 BRCC3P46736 316 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 CYP24A1Q07973 514 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 MORC3Q14149 939 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 KIAA0319Q5VV43 1072 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 C9orf57Q5W0N0 161 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 EP400NLQ6ZTU2 488 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 ADSSL1Q8N142 457 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 HLA-CQ95604 372 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 CCDC127Q96BQ5 260 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 FNBP1Q96RU3 617 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 CDCA3Q99618 268 aaPredicted RBP17.29■□□□□ 0.36
HDHD3-202ENST00000374180 TTPALQ9BTX7 342 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 FRMD4BQ9Y2L6 1034 aa17.29■□□□□ 0.36
HDHD3-202ENST00000374180 BRWD1Q9NSI6 2320 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 I3L4J1 428 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 LILRB3O75022 631 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 DLATP10515 647 aaKnown RBP17.28■□□□□ 0.36
HDHD3-202ENST00000374180 BMP6P22004 513 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 NR2F2P24468 414 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 MCM4P33991 863 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 PPP1R2P41236 205 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 ADAM9Q13443 819 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 PSMD6Q15008 389 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 NFIL3Q16649 462 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 DUSP6Q16828 381 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 DUOXA2Q1HG44 320 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 EDRF1Q3B7T1 1238 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 CENPPQ6IPU0 288 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 GPR65Q8IYL9 337 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 GPT2Q8TD30 523 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 RIN2Q8WYP3 895 aaPredicted RBP17.28■□□□□ 0.36
HDHD3-202ENST00000374180 MFSD14AQ96MC6 490 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 TSG101Q99816 390 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 EMILIN2Q9BXX0 1053 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 NUP62CLQ9H1M0 184 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms