RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 GUCY2CP25092 1073 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 MPSTP25325 297 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 LSP1P33241 339 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 ETFBP38117 255 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 SEC13P55735 322 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 SPRED3Q2MJR0 410 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 SLC39A4Q6P5W5 647 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 ANO5Q75V66 913 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 SAMD7Q7Z3H4 446 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 TMC3Q7Z5M5 1100 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 C14orf80Q86SX3 495 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 VPS36Q86VN1 386 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 RASGEF1CQ8N431 466 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 MDM1Q8TC05 714 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 KAT2BQ92831 832 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 TATDN2Q93075 761 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 PBKQ96KB5 322 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 ATP6V1G3Q96LB4 118 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 AGPAT1Q99943 283 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 FAM118BQ9BPY3 351 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 RASSF4Q9H2L5 321 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 PPANQ9NQ55 473 aaKnown RBP6.85□□□□□ -1.31
CHD6-202ENST00000373222 SIRPGQ9P1W8 387 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 CTTNBP2NLQ9P2B4 639 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 ODF2LQ9ULJ1 636 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 LZTS1Q9Y250 596 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 PTPN22Q9Y2R2 807 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 SNX24Q9Y343 169 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 NCANO14594 1321 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 O00370 1275 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 NDUFAB1O14561 156 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 SLC26A4O43511 780 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 ZNF862O60290 1169 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 CFHP08603 1231 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 TMEM253P0C7T8 217 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 DLATP10515 647 aaKnown RBP6.85□□□□□ -1.31
CHD6-202ENST00000373222 PYGMP11217 842 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 COL6A1P12109 1028 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 KRT13P13646 458 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 VCAM1P19320 739 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 CORO7P57737 925 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 FSTL1Q12841 308 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 SIM2Q14190 667 aaPredicted RBP6.85□□□□□ -1.31
CHD6-202ENST00000373222 KIF22Q14807 665 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 SUZ12Q15022 739 aaKnown RBP6.85□□□□□ -1.31
CHD6-202ENST00000373222 PGM5Q15124 567 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 XKR9Q5GH70 373 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 C10orf76Q5T2E6 689 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 MREGQ8N565 214 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 FBXO25Q8TCJ0 367 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 TAS1R2Q8TE23 839 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 ZKSCAN4Q969J2 545 aaPredicted RBP6.85□□□□□ -1.31
CHD6-202ENST00000373222 GPRASP2Q96D09 838 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 HERPUD2Q9BSE4 406 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 EPB41L4BQ9H329 900 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 PPCSQ9HAB8 311 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 FAM169AQ9Y6X4 670 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 MGAMO43451 1857 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 RLFQ13129 1914 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 ZBTB24O43167 697 aaPredicted RBP6.84□□□□□ -1.31
CHD6-202ENST00000373222 PLS3P13797 630 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 LMNB1P20700 586 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 COMTP21964 271 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 CALRP27797 417 aaKnown RBP6.84□□□□□ -1.31
CHD6-202ENST00000373222 HOXA7P31268 230 aaPredicted RBP6.84□□□□□ -1.31
CHD6-202ENST00000373222 QARSP47897 775 aaKnown RBP6.84□□□□□ -1.31
CHD6-202ENST00000373222 MXI1P50539 228 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 PLTPP55058 493 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 PRSS12P56730 875 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 SKOR1P84550 965 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 SNRNP35Q16560 246 aaKnown RBP6.84□□□□□ -1.31
CHD6-202ENST00000373222 PKDCCQ504Y2 493 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 FAM182AQ5T1J6 154 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 ANKS3Q6ZW76 656 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 DEFB132Q7Z7B7 95 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 TTLL6Q8N841 843 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 WHAMMQ8TF30 809 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 ATG4CQ96DT6 458 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 TEPSINQ96N21 525 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 RMDN3Q96TC7 470 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 TMBIM4Q9HC24 238 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 PTPRHQ9HD43 1115 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 DNAJC17Q9NVM6 304 aaKnown RBP6.84□□□□□ -1.31
CHD6-202ENST00000373222 SEL1LQ9UBV2 794 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 NOCTQ9UK39 431 aaKnown RBP6.84□□□□□ -1.31
CHD6-202ENST00000373222 FEM1BQ9UK73 627 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 RPTORQ8N122 1335 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 LCTP09848 1927 aa6.84□□□□□ -1.31
CHD6-202ENST00000373222 A0A0A6YYK5 440 aaPredicted RBP6.84□□□□□ -1.32
CHD6-202ENST00000373222 E7EVH7 732 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 KLF4O43474 513 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 TIMM44O43615 452 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 GJB6O95452 261 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 GNA15P30679 374 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 NPTX2P47972 431 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 FMO1Q01740 532 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 KCTD2Q14681 263 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 PPP2R5AQ15172 486 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 SEZ6Q53EL9 994 aa6.84□□□□□ -1.32
CHD6-202ENST00000373222 INO80DQ53TQ3 878 aaPredicted RBP6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms