RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 POTEIP0CG38 1075 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 SRGNP10124 158 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 NAT2P11245 290 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 MYCLP1P12525 358 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 VAV1P15498 845 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 NFKBIAP25963 317 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 CDC25AP30304 524 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 BAG6P46379 1132 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 STX17P56962 302 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 SPIDRQ14159 915 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 CCDC153Q494R4 210 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 OTUD6AQ7L8S5 288 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 SPATA24Q86W54 205 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 NUDCD1Q96RS6 583 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 SPSB2Q99619 263 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 TMEM60Q9H2L4 133 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 THAP9Q9H5L6 903 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 USP15Q9Y4E8 981 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 ZSCAN5CA6NGD5 496 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 BOLA2-SMG1P6H3BVE0 249 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 PABPC4LP0CB38 370 aaKnown RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 GSTT2P0CG29 244 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 GSTT2BP0CG30 244 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 GM2AP17900 193 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 HMGB2P26583 209 aaKnown RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 CTNNA1P35221 906 aaKnown RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 ACADVLP49748 655 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 CDK7P50613 346 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 ADRM1Q16186 407 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 PDCD4Q53EL6 469 aaKnown RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 ZC2HC1CQ53FD0 456 aaPredicted RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 PLEKHG4Q58EX7 1191 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 CERS5Q8N5B7 392 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 SLC17A8Q8NDX2 589 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 OR2W6PQ8NHA6 318 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 EPS8L3Q8TE67 593 aaKnown RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 ATP6V0A1Q93050 837 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 LRCH3Q96II8 777 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 DNAJC7Q99615 494 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
ATG4A-203ENST00000372232 DPH5Q9H2P9 285 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 RXFP1Q9HBX9 757 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 KBTBD4Q9NVX7 518 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 STOML1Q9UBI4 398 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 RNF14Q9UBS8 474 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 HEY1Q9Y5J3 304 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 FADS3Q9Y5Q0 445 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 USH1CQ9Y6N9 552 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 LTBP1Q14766 1721 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 DDX60LQ5H9U9 1706 aaKnown RBP9.41□□□□□ -0.9
ATG4A-203ENST00000372232 ESYT3A0FGR9 886 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 DCDC2CA8MYV0 355 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 LAD1O00515 517 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 SART1O43290 800 aaKnown RBP9.41□□□□□ -0.9
ATG4A-203ENST00000372232 TACC1O75410 805 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 SERPINB7O75635 380 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 GJB6O95452 261 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 SHBGP04278 402 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 PDE6CP51160 858 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 EMP3P54852 163 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 NAPAP54920 295 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 RTP1P59025 263 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 CYP4A11Q02928 519 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 PPARDQ03181 441 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 GABPAQ06546 454 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-203ENST00000372232 MDM1Q8TC05 714 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 USP33Q8TEY7 942 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 CAMKK2Q96RR4 588 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 ZC3H12CQ9C0D7 883 aaKnown RBP9.41□□□□□ -0.9
ATG4A-203ENST00000372232 MRPL46Q9H2W6 279 aaKnown RBP9.41□□□□□ -0.9
ATG4A-203ENST00000372232 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 PTTG2Q9NZH5 202 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 LIMA1Q9UHB6 759 aaKnown RBP9.41□□□□□ -0.9
ATG4A-203ENST00000372232 FAM32AQ9Y421 112 aaKnown RBP9.41□□□□□ -0.9
ATG4A-203ENST00000372232 CAPN6Q9Y6Q1 641 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 PLIN4Q96Q06 1357 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 RGPD3A6NKT7 1758 aaPredicted RBP9.41□□□□□ -0.9
ATG4A-203ENST00000372232 RGPD4Q7Z3J3 1758 aa9.41□□□□□ -0.9
ATG4A-203ENST00000372232 SMCO2A6NFE2 343 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 PLSCR1O15162 318 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 UNC5CO95185 931 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 LYNP07948 512 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 MYBP10242 640 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 ETS2P15036 469 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 CPA3P15088 417 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 CHN1P15882 459 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 NPR1P16066 1061 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 S100A1P23297 94 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 GNA11P29992 359 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 CYLC1P35663 651 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-203ENST00000372232 FOXD4Q12950 439 aaPredicted RBP9.4□□□□□ -0.9
ATG4A-203ENST00000372232 PICALMQ13492 652 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 MEA1Q16626 185 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 CYP4X1Q8N118 509 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 AGGF1Q8N302 714 aaeCLIP9.4□□□□□ -0.93e-7■■■■□ 19.7
ATG4A-203ENST00000372232 SUPT20HQ8NEM7 779 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 GDAP1Q8TB36 358 aa9.4□□□□□ -0.9
ATG4A-203ENST00000372232 TMEM237Q96Q45 408 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms