RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 NCK2O43639 380 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 KIF4AO95239 1232 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 ARIH2O95376 493 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 IQCF3P0C7M6 154 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 RFC2P35250 354 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
LDB3-204ENST00000372066 HADHBP55084 474 aaKnown RBP15.15■□□□□ 0.02
LDB3-204ENST00000372066 PTPN11Q06124 597 aaPredicted RBP15.15■□□□□ 0.02
LDB3-204ENST00000372066 PPP3CAQ08209 521 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 BFSP2Q13515 415 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 CASP8Q14790 479 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 TCEAL1Q15170 157 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 C1orf220Q5T0J3 134 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 KRT39Q6A163 491 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 PHLDB3Q6NSJ2 640 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 SEPT14Q6ZU15 432 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 LNX1Q8TBB1 728 aaPredicted RBP15.15■□□□□ 0.02
LDB3-204ENST00000372066 CTNNBL1Q8WYA6 563 aaPredicted RBP15.15■□□□□ 0.02
LDB3-204ENST00000372066 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
LDB3-204ENST00000372066 ARHGAP28Q9P2N2 729 aa15.15■□□□□ 0.02
LDB3-204ENST00000372066 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
LDB3-204ENST00000372066 MAFBQ9Y5Q3 323 aaPredicted RBP15.15■□□□□ 0.02
LDB3-204ENST00000372066 SPTBN5Q9NRC6 3674 aaKnown RBP15.14■□□□□ 0.01
LDB3-204ENST00000372066 PITPNM1O00562 1244 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 ZC3H11AO75152 810 aaKnown RBP eCLIP15.14■□□□□ 0.01
LDB3-204ENST00000372066 FTCDO95954 541 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 OATP04181 439 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 TGFB3P10600 412 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 RFC5P40937 340 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 MFAP3P55082 362 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 TNNC1P63316 161 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 DLG4P78352 724 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 DMTNQ08495 405 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 CLUL1Q15846 466 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 LY6KQ17RY6 165 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 C8orf74Q6P047 294 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 CCNI2Q6ZMN8 369 aaPredicted RBP15.14■□□□□ 0.01
LDB3-204ENST00000372066 GPD1LQ8N335 351 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 PARD3BQ8TEW8 1205 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 AFG1LQ8WV93 481 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 MFSD14AQ96MC6 490 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 TMEM117Q9H0C3 514 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 MED4Q9NPJ6 270 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 XPNPEP1Q9NQW7 623 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
LDB3-204ENST00000372066 IGKV6D-21A0A0A0MT36 114 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 ANKRD62A6NC57 917 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 RFXAPO00287 272 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 GH1P01241 217 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 PIGRP01833 764 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 CA3P07451 260 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 ADRB2P07550 413 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 OAS2P29728 719 aaKnown RBP15.13■□□□□ 0.01
LDB3-204ENST00000372066 ADSSP30520 456 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 GCLMP48507 274 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 GPC3P51654 580 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 GALCP54803 685 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 NEDD9Q14511 834 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 PTGISQ16647 500 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 FAM160B1Q5W0V3 765 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 CCDC62Q6P9F0 684 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 KCNV1Q6PIU1 500 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 ENOSF1Q7L5Y1 443 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 GLYCTKQ8IVS8 523 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 RHOT2Q8IXI1 618 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 PHOSPHO2Q8TCD6 241 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 ACTRT1Q8TDG2 376 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 ADAMTS19Q8TE59 1207 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 AGPAT1Q99943 283 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 NIFKQ9BYG3 293 aaKnown RBP15.13■□□□□ 0.01
LDB3-204ENST00000372066 POLR3FQ9H1D9 316 aaPredicted RBP15.13■□□□□ 0.01
LDB3-204ENST00000372066 CERS4Q9HA82 394 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 UBE2TQ9NPD8 197 aaPredicted RBP15.13■□□□□ 0.01
LDB3-204ENST00000372066 STIM2Q9P246 746 aa15.13■□□□□ 0.01
LDB3-204ENST00000372066 MYO9BQ13459 2157 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 TISP43B9A030 160 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 ANKRD63C9JTQ0 380 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 CXCR5P32302 372 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 NAMPTP43490 491 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 POLGP54098 1239 aaPredicted RBP15.12■□□□□ 0.01
LDB3-204ENST00000372066 CYP24A1Q07973 514 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 EMC2Q15006 297 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 SKIV2LQ15477 1246 aaKnown RBP15.12■□□□□ 0.01
LDB3-204ENST00000372066 TERF2Q15554 542 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 ARHGAP44Q17R89 818 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 PEX26Q7Z412 305 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 BSNDQ8WZ55 320 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 POMGNT1Q8WZA1 660 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 SLC9A7Q96T83 725 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 SH2D3AQ9BRG2 576 aa15.12■□□□□ 0.01
LDB3-204ENST00000372066 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
LDB3-204ENST00000372066 FOXN3O00409 490 aaPredicted RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 HNRNPDLO14979 420 aaKnown RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 MMP3P08254 477 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 AARSP49588 968 aaKnown RBP eCLIP15.11■□□□□ 0.01
LDB3-204ENST00000372066 STRN3Q13033 797 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 NNTQ13423 1086 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 HSP90B2PQ58FF3 399 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 SMYD5Q6GMV2 418 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms