RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 GTF3C4Q9UKN8 822 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 PLAGL2Q9UPG8 496 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 MYH8P13535 1937 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 LACTBL1A8MY62 500 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 PPP6R2O75170 966 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 PNMA6AP0CW24 399 aaPredicted RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 GRIK1P39086 918 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 PEX19P40855 299 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 NASPP49321 788 aaPredicted RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 RGS7P49802 495 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 CLCNKBP51801 687 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 PTENP60484 403 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 PUS10Q3MIT2 529 aaKnown RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 LSM14AQ8ND56 463 aaKnown RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 ZNF512Q96ME7 567 aaPredicted RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 POLR3CQ9BUI4 534 aaPredicted RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 SAMSN1Q9NSI8 373 aaKnown RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 ANO10Q9NW15 660 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 FAM53CQ9NYF3 392 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 CWC15Q9P013 229 aaKnown RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 BARX2Q9UMQ3 279 aaPredicted RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 ZNF232Q9UNY5 417 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 CABIN1Q9Y6J0 2220 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 NFASCO94856 1347 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 TMEM110-MUSTN1A8MSY1 372 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 NR3C1P04150 777 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 TPM1P09493 284 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 SKOR2Q2VWA4 1001 aaPredicted RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 MARCH8Q5T0T0 291 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 CNKSR3Q6P9H4 555 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 ANKLE1Q8NAG6 615 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 FLCNQ8NFG4 579 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 TNFRSF25Q93038 417 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 NECAB3Q96P71 396 aaPredicted RBP7.56□□□□□ -1.2
USP1-202ENST00000371146 RAD9AQ99638 391 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 CORO1BQ9BR76 489 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 CDT1Q9H211 546 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 TUBGCP4Q9UGJ1 667 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 PCDHGA4Q9Y5G9 962 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 CDY1Q9Y6F8 540 aa7.56□□□□□ -1.2
USP1-202ENST00000371146 ADGRA3Q8IWK6 1321 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 IGSF9BQ9UPX0 1349 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 GRM6O15303 877 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 CCL16O15467 120 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 CTIFO43310 598 aaKnown RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 XPOTO43592 962 aaKnown RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 ACTN4O43707 911 aaKnown RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 TOM1L1O75674 476 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 RFPL2O75678 378 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 NFICP08651 508 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 NAMPTP43490 491 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 ZNF699Q32M78 642 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 HABP4Q5JVS0 413 aaKnown RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 IQCEQ6IPM2 695 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 IGSF22Q8N9C0 903 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 ZNF653Q96CK0 615 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 AGAP3Q96P47 875 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 COLEC11Q9BWP8 271 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 USP25Q9UHP3 1055 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 PCDHB4Q9Y5E5 795 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 EMSYQ7Z589 1322 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 ARL5CA6NH57 179 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 GOLGA8SH3BPF8 625 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 MYO1CO00159 1063 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 ACKR2O00590 384 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 MOCS2O96007 188 aaPredicted RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 NAT1P18440 290 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 PAX3P23760 479 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 APBA1Q02410 837 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 TYRO3Q06418 890 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 SNRNP35Q16560 246 aaKnown RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 ARSHQ5FYA8 562 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 ZNF667Q5HYK9 610 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 JADE1Q6IE81 842 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 NIPA1Q7RTP0 329 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 KRT222Q8N1A0 295 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 SAMD3Q8N6K7 520 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 CXCL16Q9H2A7 254 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 TSPYL2Q9H2G4 693 aaPredicted RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 TBC1D13Q9NVG8 400 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 FANCLQ9NW38 375 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 TMEM63CQ9P1W3 806 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 KIAA1468Q9P260 1216 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 CHORDC1Q9UHD1 332 aaPredicted RBP7.55□□□□□ -1.2
USP1-202ENST00000371146 NRBP1Q9UHY1 535 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 DACH1Q9UI36 760 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 FBXL21Q9UKT6 434 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 SMAPO00193 183 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 CYB561D2O14569 222 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 EDIL3O43854 480 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 FGF18O76093 207 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 GJB5O95377 273 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 IRS1P35568 1242 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 MXI1P50539 228 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 MYO1EQ12965 1108 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 CCDC183Q5T5S1 534 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 RESP18Q5W5W9 173 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 TRIM74Q86UV6 250 aa7.55□□□□□ -1.2
USP1-202ENST00000371146 TRIM73Q86UV7 250 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms