RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 XKR3Q5GH77 459 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 TADA2AO75478 443 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 IRF1P10914 325 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 SEMA3FQ13275 785 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 ZCWPW1Q9H0M4 648 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 PCSK7Q16549 785 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 PATL1Q86TB9 770 aaKnown RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 LBHD1Q9BQE6 289 aaPredicted RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 TIPINQ9BVW5 301 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 NDUFB10O96000 172 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 CYBBP04839 570 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 KRT72Q14CN4 511 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 SKIV2LQ15477 1246 aaKnown RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 ZC2HC1CQ53FD0 456 aaPredicted RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 CCSER1Q9C0I3 900 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 SENP1Q9P0U3 644 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 CLCA2Q9UQC9 943 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 SRGNP10124 158 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 CHN1P15882 459 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 ADSSL1Q8N142 457 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 SH2D3CQ8N5H7 860 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 RBM15Q96T37 977 aaKnown RBP eCLIP23.28■■□□□ 1.322e-11■■□□□ 12.8
TM9SF3-201ENST00000371142 C7orf25Q9BPX7 421 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 MARCOQ9UEW3 520 aaPredicted RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 ZC3H7BQ9UGR2 993 aaKnown RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 CDV3Q9UKY7 258 aaKnown RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 PJA2O43164 708 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 DYNC1LI2O43237 492 aaPredicted RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 C4orf33Q8N1A6 199 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 TMA16Q96EY4 203 aaKnown RBP23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 SMARCAL1Q9NZC9 954 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 ABCA8O94911 1581 aa23.28■■□□□ 1.32
TM9SF3-201ENST00000371142 A0A1B0GTH6 734 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 CFAP73A6NFT4 308 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 SPDYE5A6NIY4 337 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 UCHL3P15374 230 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 MAP4P27816 1152 aaKnown RBP23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 SPDYE7PQ495Y7 208 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 SYDE1Q6ZW31 735 aaPredicted RBP23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 RAET1EQ8TD07 263 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 GPBP1L1Q9HC44 474 aaPredicted RBP23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 CYTH1Q15438 398 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 MYMKA6NI61 221 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 PABPC5Q96DU9 382 aaKnown RBP23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 PCMTD2Q9NV79 361 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 TRAF3IP3Q9Y228 551 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 FHOD1Q9Y613 1164 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 EEF2KO00418 725 aaKnown RBP23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 MAN1A2O60476 641 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 EMC2Q15006 297 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 SLC24A3Q9HC58 644 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 ARHGEF38Q9NXL2 777 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 ZNF609O15014 1411 aa23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 EN1Q05925 392 aaPredicted RBP23.27■■□□□ 1.32
TM9SF3-201ENST00000371142 KIAA0391O15091 583 aaKnown RBP23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 HDAC4P56524 1084 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 USP10Q14694 798 aaKnown RBP23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 RAB42Q8N4Z0 105 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 C9orf72Q96LT7 481 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 TSSK1BQ9BXA7 367 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 IGDCC4Q8TDY8 1250 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 PTPRN2Q92932 1015 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 ARHGEF26Q96DR7 871 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 ADNPQ9H2P0 1102 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 UVRAGQ9P2Y5 699 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 NEU2Q9Y3R4 380 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 ATMINO43313 823 aaPredicted RBP23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 TRAPPC3O43617 180 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 SOX11P35716 441 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 IL31Q6EBC2 164 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 SCFD1Q8WVM8 642 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 UPP2O95045 317 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 AKT1P31749 480 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 SGSM1Q2NKQ1 1148 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 ANKS3Q6ZW76 656 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 FAM49BQ9NUQ9 324 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 ARHGAP10A1A4S6 786 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 TSGA10IPQ3SY00 556 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 DTX3LQ8TDB6 740 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 ZFYVE19Q96K21 471 aa23.26■■□□□ 1.31
TM9SF3-201ENST00000371142 KRT4P19013 534 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 RABGAP1LQ5R372 815 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 ADCK2Q7Z695 626 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 SMARCAD1Q9H4L7 1026 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 A0A0G2JLW4 131 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 AGTP01019 485 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 KLK7P49862 253 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 SLC25A41Q8N5S1 370 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 B4GALNT2Q8NHY0 566 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 MED15Q96RN5 788 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 SEPT5Q99719 369 aaPredicted RBP23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 TEX13BQ9BXU2 312 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 MUC3BQ9H195 1237 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 TASP1Q9H6P5 420 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 HIST1H2AGP0C0S8 130 aaPredicted RBP23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 HIST1H2ADP20671 130 aa23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 MDH1P40925 334 aaKnown RBP23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 ATXN3P54252 364 aaPredicted RBP23.25■■□□□ 1.31
TM9SF3-201ENST00000371142 GTF2H3Q13889 308 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms