RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CDR2Q01850 454 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 P3H1Q32P28 736 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 ZC3H15Q8WU90 426 aaKnown RBP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 TMX2Q9Y320 296 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 NEU2Q9Y3R4 380 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 FAM237AA0A1B0GTK4 181 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 AP3B1O00203 1094 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 GZMAP12544 262 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 LSP1P33241 339 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 PID1Q7Z2X4 250 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 RIBC1Q8N443 379 aaPredicted RBP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 C9orf72Q96LT7 481 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 XPO6Q96QU8 1125 aaKnown RBP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 MRPL40Q9NQ50 206 aaKnown RBP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 OLFML3Q9NRN5 406 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 INPP5FQ9Y2H2 1132 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 HBP1O60381 514 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SLC4A1P02730 911 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 MMP14P50281 582 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 C1orf228Q6PIY5 440 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SCFD2Q8WU76 684 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 ARHGEF26Q96DR7 871 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SPDL1Q96EA4 605 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 UNC45AQ9H3U1 944 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SNX9Q9Y5X1 595 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 CAPN6Q9Y6Q1 641 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 IQCA1LA6NCM1 817 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 ZC3H11AO75152 810 aaKnown RBP eCLIP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 PEX19P40855 299 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 AP1B1Q10567 949 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SLC13A5Q86YT5 568 aaPredicted RBP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 NDUFAF2Q8N183 169 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 GTF3C2Q8WUA4 911 aaPredicted RBP12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SCFD1Q8WVM8 642 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 WWP1Q9H0M0 922 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SUN2Q9UH99 717 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 BIRC2Q13490 618 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 ACAD10Q6JQN1 1059 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 KRT80Q6KB66 452 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 TTC8Q8TAM2 541 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 FEZF2Q8TBJ5 459 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 ACER1Q8TDN7 264 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 PRMT6Q96LA8 375 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 MCEEQ96PE7 176 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 EPAS1Q99814 870 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 RSAD1Q9HA92 442 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 ZFATQ9P243 1243 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 TCP11X1B4DZS4 312 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 FOXN3O00409 490 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 CHN1P15882 459 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 GTF2H1P32780 548 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 RFC1P35251 1148 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 GRAMD1BQ3KR37 738 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 TRIM4Q9C037 500 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 TFR2Q9UP52 801 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 RSPH10B2B2RC85 870 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 POLRMTO00411 1230 aaKnown RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 GH1P01241 217 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 RSPH10BP0C881 870 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 HSD17B4P51659 736 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 ANGEL2Q5VTE6 544 aaKnown RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 BTBD6Q96KE9 485 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 PNKPQ96T60 521 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 ZSWIM1Q9BR11 485 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 NT5C1AQ9BXI3 368 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 SLC13A1Q9BZW2 595 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 ARHGAP20Q9P2F6 1191 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 FNDC3AQ9Y2H6 1198 aaKnown RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 A0A0A6YYK5 440 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 FAM47DPA6NHR8 397 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 COILP38432 576 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 MAPK7Q13164 816 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 ATF7IP2Q5U623 682 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 MTHFD1LQ6UB35 978 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 RPAINQ86UA6 219 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 DDX42Q86XP3 938 aaKnown RBP eCLIP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 PRPF31Q8WWY3 499 aaKnown RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 MED15Q96RN5 788 aa12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 FRMD8Q9BZ67 464 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 PSMC3IPQ9P2W1 217 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 USP15Q9Y4E8 981 aaPredicted RBP12.49□□□□□ -0.41
DEPDC1-201ENST00000370966 LRRC10BA6NIK2 292 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 GNGT2O14610 69 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 GARTP22102 1010 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 GJB7Q6PEY0 223 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 ZNF720Q7Z2F6 126 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms