RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 N4BP3O15049 544 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 PPP6R2O75170 966 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 RPS9P46781 194 aaKnown RBP16.58■□□□□ 0.24
RPF1-202ENST00000370656 GNL2Q13823 731 aaKnown RBP16.58■□□□□ 0.24
RPF1-202ENST00000370656 RAB33AQ14088 237 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.58■□□□□ 0.24
RPF1-202ENST00000370656 ZNF852Q6ZMS4 543 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 ZBTB44Q8NCP5 570 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 HSD17B14Q9BPX1 270 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 ADPGKQ9BRR6 497 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 FAM126AQ9BYI3 521 aaPredicted RBP16.58■□□□□ 0.24
RPF1-202ENST00000370656 GDE1Q9NZC3 331 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 CACNG4Q9UBN1 327 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 CDV3Q9UKY7 258 aaKnown RBP16.58■□□□□ 0.24
RPF1-202ENST00000370656 SMG5Q9UPR3 1016 aaKnown RBP16.58■□□□□ 0.24
RPF1-202ENST00000370656 MRPS23Q9Y3D9 190 aaKnown RBP16.58■□□□□ 0.24
RPF1-202ENST00000370656 CLIC4Q9Y696 253 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 NOTCH4Q99466 2003 aa16.58■□□□□ 0.24
RPF1-202ENST00000370656 KMT2BQ9UMN6 2715 aaPredicted RBP16.57■□□□□ 0.24
RPF1-202ENST00000370656 A0A1W2PQ27 194 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 A0A1W2PQ64 194 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 A0A1W2PQD8 194 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 TBC1D4O60343 1298 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 XRCC6P12956 609 aaKnown RBP eCLIP16.57■□□□□ 0.24
RPF1-202ENST00000370656 CD72P21854 359 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 OR1D2P34982 312 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 RARRES1P49788 294 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 CALCRLQ16602 461 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 ADALQ6DHV7 355 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 TPRG1Q6ZUI0 275 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 NPAS3Q8IXF0 933 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 CLDN23Q96B33 292 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 C2orf40Q9H1Z8 148 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 EPC1Q9H2F5 836 aa16.57■□□□□ 0.24
RPF1-202ENST00000370656 SPTLC2O15270 562 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 USO1O60763 962 aaKnown RBP16.56■□□□□ 0.24
RPF1-202ENST00000370656 ECI2O75521 394 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 PPP2R5DQ14738 602 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 FAM187BQ17R55 369 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 EARS2Q5JPH6 523 aaKnown RBP16.56■□□□□ 0.24
RPF1-202ENST00000370656 MCPH1Q8NEM0 835 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 TTC12Q9H892 705 aaPredicted RBP16.56■□□□□ 0.24
RPF1-202ENST00000370656 HCFC1R1Q9NWW0 138 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 SNTG2Q9NY99 539 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 DNMT3BQ9UBC3 853 aaKnown RBP16.56■□□□□ 0.24
RPF1-202ENST00000370656 GMEB2Q9UKD1 530 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 COL4A3Q01955 1670 aa16.56■□□□□ 0.24
RPF1-202ENST00000370656 TRIP11Q15643 1979 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 FAM237AA0A1B0GTK4 181 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 PTGESO14684 152 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 ADAM12O43184 909 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 TRAPPC3O43617 180 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 LILRB5O75023 590 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 RECQL4O94761 1208 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 BMP15O95972 392 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 TARSP26639 723 aaKnown RBP16.55■□□□□ 0.24
RPF1-202ENST00000370656 ATXN1P54253 815 aaKnown RBP16.55■□□□□ 0.24
RPF1-202ENST00000370656 NRLP54845 237 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 PRPF4BQ13523 1007 aaKnown RBP16.55■□□□□ 0.24
RPF1-202ENST00000370656 SF3A1Q15459 793 aaKnown RBP16.55■□□□□ 0.24
RPF1-202ENST00000370656 MAPK6Q16659 721 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 CDCA2Q69YH5 1023 aaPredicted RBP16.55■□□□□ 0.24
RPF1-202ENST00000370656 PIGOQ8TEQ8 1089 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 ING5Q8WYH8 240 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 FZD8Q9H461 694 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 PDZD7Q9H5P4 517 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 MTRRQ9UBK8 725 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 RAB23Q9ULC3 237 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 USP18Q9UMW8 372 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 PCDHA7Q9UN72 937 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 CDY1Q9Y6F8 540 aa16.55■□□□□ 0.24
RPF1-202ENST00000370656 TMEM189-UBE2V1I3L0A0 370 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 MAN2B1O00754 1011 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 B3GAT3O94766 335 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 ATP2B1P20020 1258 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 FGFR3P22607 806 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 STK38Q15208 465 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 ANKS3Q6ZW76 656 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 MAEAQ7L5Y9 396 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 NELL1Q92832 810 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 DNASE1L2Q92874 299 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 ELSPBP1Q96BH3 223 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 MCRS1Q96EZ8 462 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 RTKNQ9BST9 563 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 AVENQ9NQS1 362 aaPredicted RBP16.54■□□□□ 0.24
RPF1-202ENST00000370656 PRMT8Q9NR22 394 aaPredicted RBP16.54■□□□□ 0.24
RPF1-202ENST00000370656 NOL7Q9UMY1 257 aaKnown RBP16.54■□□□□ 0.24
RPF1-202ENST00000370656 BACE2Q9Y5Z0 518 aa16.54■□□□□ 0.24
RPF1-202ENST00000370656 LRG1P02750 347 aa16.53■□□□□ 0.24
RPF1-202ENST00000370656 RHOP08100 348 aa16.53■□□□□ 0.24
RPF1-202ENST00000370656 PTPN2P17706 415 aa16.53■□□□□ 0.24
RPF1-202ENST00000370656 ELF1P32519 619 aa16.53■□□□□ 0.24
RPF1-202ENST00000370656 TXKP42681 527 aa16.53■□□□□ 0.24
RPF1-202ENST00000370656 ORC2Q13416 577 aaPredicted RBP16.53■□□□□ 0.24
RPF1-202ENST00000370656 NAB2Q15742 525 aa16.53■□□□□ 0.24
RPF1-202ENST00000370656 DCAF4L1Q3SXM0 396 aa16.53■□□□□ 0.24
RPF1-202ENST00000370656 APBB1IPQ7Z5R6 666 aaPredicted RBP16.53■□□□□ 0.24
RPF1-202ENST00000370656 UROC1Q96N76 676 aa16.53■□□□□ 0.24
RPF1-202ENST00000370656 IER2Q9BTL4 223 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms