RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 TIPINQ9BVW5 301 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 MANSC1Q9H8J5 431 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 SERPINB9P50453 376 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 SNRNP35Q16560 246 aaKnown RBP18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 DSTYKQ6XUX3 929 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 ARHGEF26Q96DR7 871 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 KDM4CQ9H3R0 1056 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 KCND2Q9NZV8 630 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 PCDHA10Q9Y5I2 948 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 ARHGEF37A1IGU5 675 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 PHKA2P46019 1235 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 GJB7Q6PEY0 223 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 POTEAQ6S8J7 498 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 C2orf40Q9H1Z8 148 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 RNF146Q9NTX7 359 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 DONSONQ9NYP3 566 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 E9PCH4 1651 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 EIF3DO15371 548 aaKnown RBP eCLIP18.03■□□□□ 0.487e-8■□□□□ 9.2
PTP4A1-201ENST00000370651 SNX2O60749 519 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 CAND2O75155 1236 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 SPAG6O75602 509 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 SUPT20HL1Q3ZLR7 823 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 PID1Q7Z2X4 250 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 DCPSQ96C86 337 aaKnown RBP18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 TOPORSQ9NS56 1045 aaPredicted RBP18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 ADCY3O60266 1144 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 SERPINB3P29508 390 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 MTHFD1LQ6UB35 978 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 PODNQ7Z5L7 613 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 PBXIP1Q96AQ6 731 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 ZSWIM1Q9BR11 485 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 THAP2Q9H0W7 228 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 FAM217BQ9NTX9 383 aaPredicted RBP18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 PCMTD2Q9NV79 361 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 KRT4P19013 534 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 FAM182BQ5T319 152 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 KRT27Q7Z3Y8 459 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 ACTRT1Q8TDG2 376 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 TEKT4Q8WW24 435 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 EME1Q96AY2 570 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 MAGEB5Q9BZ81 275 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 NBPF3Q9H094 633 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 PCDHB2Q9Y5E7 798 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 KIAA0391O15091 583 aaKnown RBP18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 GLI1P08151 1106 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 SNRPAP09012 282 aaKnown RBP18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 WEE2P0C1S8 567 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 RPA1P27694 616 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 NSUN2Q08J23 767 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 PIGHQ14442 188 aaPredicted RBP18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 EFHC2Q5JST6 749 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 CMTM5Q96DZ9 223 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 AURKCQ9UQB9 309 aa18.03■□□□□ 0.48
PTP4A1-201ENST00000370651 AK9Q5TCS8 1911 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 ENO3P13929 434 aaPredicted RBP18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 ST3GAL1Q11201 340 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 ARHGAP20Q9P2F6 1191 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 CNPY4Q8N129 248 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 PRPF38AQ8NAV1 312 aaKnown RBP18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 CCDC134Q9H6E4 229 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 KBTBD4Q9NVX7 518 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 PDP2Q9P2J9 529 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 WDR35Q9P2L0 1181 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 PHTF1Q9UMS5 762 aa18.02■□□□□ 0.48
PTP4A1-201ENST00000370651 SMAPO00193 183 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 RARGP13631 454 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 CPA2P48052 419 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 SNRNP48Q6IEG0 339 aaKnown RBP18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 MCEEQ96PE7 176 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 FAM49AQ9H0Q0 323 aaPredicted RBP18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 NEMP1O14524 444 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 P4HA2O15460 535 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 HUS1O60921 280 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 SEC24DO94855 1032 aaPredicted RBP18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 RASA1P20936 1047 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 PPARGP37231 505 aaPredicted RBP18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 RNF135Q8IUD6 432 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 APLFQ8IW19 511 aaPredicted RBP18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 RBBP8NLQ8NC74 664 aaPredicted RBP18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 PACSIN1Q9BY11 444 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 GTF3C4Q9UKN8 822 aa18.02■□□□□ 0.47
PTP4A1-201ENST00000370651 PDHBP11177 359 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 PDIA6Q15084 440 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 BTNL9Q6UXG8 535 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 DAGLBQ8NCG7 672 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 SH2D3AQ9BRG2 576 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 SUPT3HO75486 399 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 RCN1Q15293 331 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 FRA10AC1Q70Z53 315 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 LDHDQ86WU2 507 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 AGXT2Q9BYV1 514 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 CHORDC1Q9UHD1 332 aaPredicted RBP18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 ARHGAP26Q9UNA1 814 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 OVOS2A0A0G2JMS6 1433 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 DLC1Q96QB1 1528 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 ATP9BO43861 1147 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 PRAMEP78395 509 aa18.01■□□□□ 0.47
PTP4A1-201ENST00000370651 TBX2Q13207 712 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms