RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 LAD1O00515 517 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 ZNF213O14771 459 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 PRKAB2O43741 272 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 CYP2A6P11509 494 aaPredicted RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 STMN1P16949 149 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 PTPREP23469 700 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 KIF11P52732 1056 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 C19orf57Q0VDD7 668 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 NEDD9Q14511 834 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 MBTPS1Q14703 1052 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 SLMAPQ14BN4 828 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 ARHGEF6Q15052 776 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 MTFR1Q15390 333 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 NFIL3Q16649 462 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 RPS26P11Q5JNZ5 115 aaPredicted RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 CFAP58Q5T655 872 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 ARL6IP4Q66PJ3 421 aaKnown RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 ADALQ6DHV7 355 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 ITPRIPL1Q6GPH6 555 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 LRSAM1Q6UWE0 723 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 TTC6Q86TZ1 520 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 C2orf69Q8N8R5 385 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 MSANTD4Q8NCY6 345 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 DCAF4Q8WV16 495 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 LEO1Q8WVC0 666 aaPredicted RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 FAXDC2Q96IV6 333 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 DZANK1Q9NVP4 752 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 AATFQ9NY61 560 aaKnown RBP eCLIP4.26□□□□□ -1.73
MCF2-203ENST00000370576 C5AR2Q9P296 337 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 GRHPRQ9UBQ7 328 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 A0A1W2PQU0 124 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 PTPDC1A2A3K4 754 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 LRRC10BA6NIK2 292 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 AGAP14A8MT82 685 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 CACNB4O00305 520 aaPredicted RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 CPNE3O75131 537 aaKnown RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 FRAT2O75474 233 aaPredicted RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 MMP10P09238 476 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 YY1P25490 414 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 EIF6P56537 245 aaKnown RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 ATP2C1P98194 919 aaPredicted RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 PWP1Q13610 501 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 SLC9A5Q14940 896 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 APTXQ7Z2E3 356 aaKnown RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 PACS2Q86VP3 889 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 TEX11Q8IYF3 940 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 STT3BQ8TCJ2 826 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 ZFAND2BQ8WV99 257 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 SCLYQ96I15 445 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 ATP6V0BQ99437 205 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 LRFN3Q9BTN0 628 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 WDR18Q9BV38 432 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 SLC26A6Q9BXS9 759 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 CHRDQ9H2X0 955 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 CLSTN2Q9H4D0 955 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 ARMT1Q9H993 441 aa4.26□□□□□ -1.73
MCF2-203ENST00000370576 SCHIP1Q9P0W5 487 aaPredicted RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 NSFL1CQ9UNZ2 370 aaKnown RBP4.26□□□□□ -1.73
MCF2-203ENST00000370576 DEXIO95424 95 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 KRT13P13646 458 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 CMA1P23946 247 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 ELF1P32519 619 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 TPD52P55327 224 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 COG7P83436 770 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 ADCY1Q08828 1119 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 GRM1Q13255 1194 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 IKBKEQ14164 716 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 IQCB1Q15051 598 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 FCRLBQ6BAA4 426 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 C6orf15Q6UXA7 325 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 ARHGAP27Q6ZUM4 889 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 SV2BQ7L1I2 683 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 DPP9Q86TI2 863 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 ESX1Q8N693 406 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 FANCBQ8NB91 859 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 GOT1L1Q8NHS2 421 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 SLC7A14Q8TBB6 771 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 SLC7A3Q8WY07 619 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 CCDC17Q96LX7 622 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 CCDC74BQ96LY2 380 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 CRNKL1Q9BZJ0 848 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 SMARCAD1Q9H4L7 1026 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 MROH8Q9H579 483 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 EFCC1Q9HA90 598 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 DMRT3Q9NQL9 472 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 GLRX2Q9NS18 164 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 HPF1Q9NWY4 346 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 BARHL2Q9NY43 387 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 MTMR4Q9NYA4 1195 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 FAM153AQ9UHL3 310 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 EIF2B4Q9UI10 523 aaKnown RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 AGTPBP1Q9UPW5 1226 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 HRH3Q9Y5N1 445 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 A6NLC8 198 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 EIF3FO00303 357 aaPredicted RBP4.25□□□□□ -1.73
MCF2-203ENST00000370576 NDC80O14777 642 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 SOAT2O75908 522 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 INPP5BP32019 993 aa4.25□□□□□ -1.73
MCF2-203ENST00000370576 PIK3CBP42338 1070 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms