RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PLXNA4Q9HCM2 1894 aa14.91□□□□□ -0.02
SSR4-202ENST00000370085 ARHGEF37A1IGU5 675 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 B4GALT3O60512 393 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 FGFR1OPO95684 399 aaKnown RBP14.9□□□□□ -0.02
SSR4-202ENST00000370085 URODP06132 367 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 EPB41P11171 864 aaKnown RBP14.9□□□□□ -0.02
SSR4-202ENST00000370085 KRT13P13646 458 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 TNNI1P19237 187 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 PSMC2P35998 433 aaKnown RBP14.9□□□□□ -0.02
SSR4-202ENST00000370085 CLCNKBP51801 687 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 AP3M2P53677 418 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 SPAG1Q07617 926 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 CYP24A1Q07973 514 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 PAK1Q13153 545 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 SMC1AQ14683 1233 aaKnown RBP14.9□□□□□ -0.02
SSR4-202ENST00000370085 PSMD6Q15008 389 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 ZBTB6Q15916 424 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 DUOXA2Q1HG44 320 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 SKOR2Q2VWA4 1001 aaPredicted RBP14.9□□□□□ -0.02
SSR4-202ENST00000370085 PDXDC1Q6P996 788 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 FOXR2Q6PJQ5 311 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 INTS8Q75QN2 995 aaKnown RBP14.9□□□□□ -0.02
SSR4-202ENST00000370085 WDR49Q8IV35 697 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 C18orf25Q96B23 403 aaPredicted RBP14.9□□□□□ -0.02
SSR4-202ENST00000370085 TCF25Q9BQ70 676 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 NSUN3Q9H649 340 aaKnown RBP14.9□□□□□ -0.02
SSR4-202ENST00000370085 PDE11AQ9HCR9 933 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 DMAC2Q9NW81 257 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 CDH23Q9H251 3354 aa14.9□□□□□ -0.02
SSR4-202ENST00000370085 NCK2O43639 380 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 KIF4AO95239 1232 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 SOD2P04179 222 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 NFICP08651 508 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 DLATP10515 647 aaKnown RBP14.89□□□□□ -0.03
SSR4-202ENST00000370085 LRPAP1P30533 357 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 PNPLA4P41247 253 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 CREMQ03060 361 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 USP41Q3LFD5 358 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 ZCWPW2Q504Y3 356 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 FUT10Q6P4F1 479 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 SASS6Q6UVJ0 657 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 FAM186BQ8IYM0 893 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 MICALL1Q8N3F8 863 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 NELFBQ8WX92 580 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 CCDC127Q96BQ5 260 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 ZNF560Q96MR9 790 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 MKNK1Q9BUB5 465 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 CXCL16Q9H2A7 254 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 GOLGA2P5Q9HBQ8 144 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 MRPL17Q9NRX2 175 aaKnown RBP14.89□□□□□ -0.03
SSR4-202ENST00000370085 TUBGCP4Q9UGJ1 667 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 ITGA11Q9UKX5 1188 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 STXBP5LQ9Y2K9 1186 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 MTCH2Q9Y6C9 303 aa14.89□□□□□ -0.03
SSR4-202ENST00000370085 PRRC2BQ5JSZ5 2229 aaKnown RBP14.89□□□□□ -0.03
SSR4-202ENST00000370085 SLC16A3O15427 465 aaKnown RBP14.88□□□□□ -0.03
SSR4-202ENST00000370085 MEFVO15553 781 aaPredicted RBP14.88□□□□□ -0.03
SSR4-202ENST00000370085 LETM1O95202 739 aaPredicted RBP14.88□□□□□ -0.03
SSR4-202ENST00000370085 CTSAP10619 480 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 GLUD2P49448 558 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 SOX4Q06945 474 aaPredicted RBP14.88□□□□□ -0.03
SSR4-202ENST00000370085 ENPEPQ07075 957 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 ADGRE1Q14246 886 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 CT47A1Q5JQC4 288 aaPredicted RBP14.88□□□□□ -0.03
SSR4-202ENST00000370085 TMEM173Q86WV6 379 aaPredicted RBP14.88□□□□□ -0.03
SSR4-202ENST00000370085 GPR65Q8IYL9 337 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 ZSWIM2Q8NEG5 633 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 MFSD14AQ96MC6 490 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 CDCA3Q99618 268 aaPredicted RBP14.88□□□□□ -0.03
SSR4-202ENST00000370085 CGRRF1Q99675 332 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 PAAF1Q9BRP4 392 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 HERC2P3Q9BVR0 1158 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 EMILIN2Q9BXX0 1053 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 INTS13Q9NVM9 706 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 MARCH5Q9NX47 278 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
SSR4-202ENST00000370085 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.87□□□□□ -0.03
SSR4-202ENST00000370085 PPP1R3GB7ZBB8 358 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 STX10O60499 249 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 CSPG5O95196 566 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 CXCL14O95715 111 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 SRGAP2BP0DMP2 458 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 NLRP12P59046 1061 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 RBP5P82980 135 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 MYO1EQ12965 1108 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 TPD52L1Q16890 204 aaPredicted RBP14.87□□□□□ -0.03
SSR4-202ENST00000370085 KLHL40Q2TBA0 621 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 FAM171A1Q5VUB5 890 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 PLPP4Q5VZY2 271 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 C9orf57Q5W0N0 161 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 ANKRD40Q6AI12 368 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.87□□□□□ -0.03
SSR4-202ENST00000370085 EFCAB13Q8IY85 973 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 CSGALNACT2Q8N6G5 542 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 APPL2Q8NEU8 664 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 TMC2Q8TDI7 906 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 HASPINQ8TF76 798 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 RABGGTAQ92696 567 aa14.87□□□□□ -0.03
SSR4-202ENST00000370085 CEP63Q96MT8 703 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms