RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 IP6K2Q9UHH9 426 aa10.91□□□□□ -0.66
TPM3-209ENST00000368527 ANAPC7Q9UJX3 599 aa10.91□□□□□ -0.66
TPM3-209ENST00000368527 RLFQ13129 1914 aa10.91□□□□□ -0.66
TPM3-209ENST00000368527 ADGRA3Q8IWK6 1321 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 TMEM150BA6NC51 233 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 LRRIQ4A6NIV6 560 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 ASAP2O43150 1006 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 TOM1L1O75674 476 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 CPP00450 1065 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 CLTAP09496 248 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 PYGMP11217 842 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 GLRA2P23416 452 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 CCT5P48643 541 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 ALDH5A1P51649 535 aaPredicted RBP10.9□□□□□ -0.66
TPM3-209ENST00000368527 PLTPP55058 493 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 MCL1Q07820 350 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 PDCLQ13371 301 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 ZNF211Q13398 564 aaPredicted RBP10.9□□□□□ -0.66
TPM3-209ENST00000368527 PTK6Q13882 451 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 TFDP1Q14186 410 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 PPP1R7Q15435 360 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 SGO2Q562F6 1265 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 KCTD16Q68DU8 428 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 METTL7BQ6UX53 244 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 MON1BQ7L1V2 547 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 TAS1R3Q7RTX0 852 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 PLPPR4Q7Z2D5 763 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 NLRP14Q86W24 1093 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 DDX42Q86XP3 938 aaKnown RBP eCLIP10.9□□□□□ -0.66
TPM3-209ENST00000368527 BRSK2Q8IWQ3 736 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 CCDC89Q8N998 374 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 ATL2Q8NHH9 583 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 EXD1Q8NHP7 514 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 KRT35Q92764 455 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 ZKSCAN4Q969J2 545 aaPredicted RBP10.9□□□□□ -0.66
TPM3-209ENST00000368527 SNF8Q96H20 258 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 TRIM51Q9BSJ1 452 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 CELF4Q9BZC1 486 aaKnown RBP10.9□□□□□ -0.66
TPM3-209ENST00000368527 NEUROG2Q9H2A3 272 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 SLC12A6Q9UHW9 1150 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 BCS1LQ9Y276 419 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 ATP8A1Q9Y2Q0 1164 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 CEP83Q9Y592 693 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 CSADQ9Y600 493 aa10.9□□□□□ -0.66
TPM3-209ENST00000368527 ADGRA2Q96PE1 1338 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 SIP14410 1827 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 GMNCA6NCL1 334 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 CXCL11O14625 94 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 RGS16O15492 202 aaPredicted RBP10.89□□□□□ -0.67
TPM3-209ENST00000368527 CLDN3O15551 220 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 EGFRP00533 1210 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 GNA15P30679 374 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 PTPN7P35236 360 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 STAT5BP51692 787 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 PLCB4Q15147 1175 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 TRADDQ15628 312 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 CCNG2Q16589 344 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 SGSM1Q2NKQ1 1148 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
TPM3-209ENST00000368527 NAA35Q5VZE5 725 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 CDCA2Q69YH5 1023 aaPredicted RBP10.89□□□□□ -0.67
TPM3-209ENST00000368527 PLEKHA7Q6IQ23 1121 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 MFSD5Q6N075 450 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 ZDHHC24Q6UX98 284 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 DNAAF5Q86Y56 855 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 TTC39CQ8N584 583 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 SH2D3CQ8N5H7 860 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 IPO4Q8TEX9 1081 aaKnown RBP10.89□□□□□ -0.67
TPM3-209ENST00000368527 GTF3C2Q8WUA4 911 aaPredicted RBP10.89□□□□□ -0.67
TPM3-209ENST00000368527 TATDN2Q93075 761 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 C18orf8Q96DM3 657 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 POP1Q99575 1024 aaKnown RBP10.89□□□□□ -0.67
TPM3-209ENST00000368527 CCDC77Q9BR77 488 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 KIFC3Q9BVG8 833 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 TRAIPQ9BWF2 469 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 CENPHQ9H3R5 247 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 PPCSQ9HAB8 311 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 TOPORSQ9NS56 1045 aaPredicted RBP10.89□□□□□ -0.67
TPM3-209ENST00000368527 DDX56Q9NY93 547 aaKnown RBP10.89□□□□□ -0.67
TPM3-209ENST00000368527 GRHL1Q9NZI5 618 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 ADAM22Q9P0K1 906 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 STRIP2Q9ULQ0 834 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 SNX24Q9Y343 169 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 PCDHB4Q9Y5E5 795 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 FAM169AQ9Y6X4 670 aa10.89□□□□□ -0.67
TPM3-209ENST00000368527 A0A0G2JMZ2 1700 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 IRF6O14896 467 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 OGTO15294 1046 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 TRAPPC3O43617 180 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 SORBS3O60504 671 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 LGR5O75473 907 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 TCEA3O75764 348 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 FARP2O94887 1054 aaPredicted RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 IL18RAPO95256 599 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 RARAP10276 462 aa10.88□□□□□ -0.67
TPM3-209ENST00000368527 ACO1P21399 889 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 UBA1P22314 1058 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 POLR2BP30876 1174 aaKnown RBP10.88□□□□□ -0.67
TPM3-209ENST00000368527 RPL21P46778 160 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms