RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PARM1Q6UWI2 310 aa13.6□□□□□ -0.23
MRPL55-209ENST00000366735 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
MRPL55-209ENST00000366735 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
MRPL55-209ENST00000366735 PPP1R10Q96QC0 940 aaKnown RBP13.6□□□□□ -0.23
MRPL55-209ENST00000366735 FOXQ1Q9C009 403 aa13.6□□□□□ -0.23
MRPL55-209ENST00000366735 BHMT2Q9H2M3 363 aa13.6□□□□□ -0.23
MRPL55-209ENST00000366735 BACE2Q9Y5Z0 518 aa13.6□□□□□ -0.23
MRPL55-209ENST00000366735 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
MRPL55-209ENST00000366735 TCHHQ07283 1943 aa13.6□□□□□ -0.23
MRPL55-209ENST00000366735 NUP210Q8TEM1 1887 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-209ENST00000366735 SPTLC1O15269 473 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 LAMTOR5O43504 91 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 SP9P0CG40 484 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 SYT1P21579 422 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
MRPL55-209ENST00000366735 CLCNKBP51801 687 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 GPC5P78333 572 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 PKP1Q13835 747 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 UBXN2BQ14CS0 331 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 UPP1Q16831 310 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 ZNF528Q3MIS6 628 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 GLRA4Q5JXX5 417 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 NPAS3Q8IXF0 933 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 PARP9Q8IXQ6 854 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 ELMOD1Q8N336 334 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 SECISBP2LQ93073 1101 aaKnown RBP13.59□□□□□ -0.23
MRPL55-209ENST00000366735 MRPL4Q9BYD3 311 aaKnown RBP13.59□□□□□ -0.23
MRPL55-209ENST00000366735 SPATA6Q9NWH7 488 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-209ENST00000366735 GDE1Q9NZC3 331 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 DLGAP2Q9P1A6 1054 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 LRWD1Q9UFC0 647 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 FBXO4Q9UKT5 387 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 TNFSF13BQ9Y275 285 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 MRPS17Q9Y2R5 130 aaKnown RBP13.59□□□□□ -0.23
MRPL55-209ENST00000366735 MRPS23Q9Y3D9 190 aaKnown RBP13.59□□□□□ -0.23
MRPL55-209ENST00000366735 KIF3AQ9Y496 699 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-209ENST00000366735 R4GN57 208 aa13.59□□□□□ -0.23
MRPL55-209ENST00000366735 TTLL13PA6NNM8 815 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 CCDC169A6NNP5 214 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 H7C4K7 107 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 PRRG1O14668 218 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 SYN3O14994 580 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 STX6O43752 255 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 ECI2O75521 394 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 GRM5P41594 1212 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 NTHL1P78549 312 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.24
MRPL55-209ENST00000366735 ZNF174Q15697 407 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 SNX29Q8TEQ0 813 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 RUBCNQ92622 972 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 GBP4Q96PP9 640 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 NELL2Q99435 816 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 KXD1Q9BQD3 176 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 KIFC3Q9BVG8 833 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 C17orf75Q9HAS0 396 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
MRPL55-209ENST00000366735 KCNG1Q9UIX4 513 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 NUB1Q9Y5A7 615 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 GVINP1Q7Z2Y8 2422 aa13.58□□□□□ -0.24
MRPL55-209ENST00000366735 ANK1P16157 1881 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 COL4A2P08572 1712 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 LAD1O00515 517 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 PODXLO00592 558 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 ZNF197O14709 1029 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 ADAM12O43184 909 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 TRAK2O60296 914 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 RHOP08100 348 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 ZSCAN22P10073 491 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-209ENST00000366735 PTPN2P17706 415 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 TKTP29401 623 aaKnown RBP13.57□□□□□ -0.24
MRPL55-209ENST00000366735 PEX3P56589 373 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 PDIA5Q14554 519 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 SLC44A4Q53GD3 710 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 ZBTB41Q5SVQ8 909 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 KRT79Q5XKE5 535 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 ZNF461Q8TAF7 563 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 ITFG1Q8TB96 612 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 DNASE1L2Q92874 299 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 ACAP3Q96P50 834 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 DDX23Q9BUQ8 820 aaKnown RBP13.57□□□□□ -0.24
MRPL55-209ENST00000366735 TIPINQ9BVW5 301 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 CDT1Q9H211 546 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 TMEM134Q9H6X4 195 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 KMT5AQ9NQR1 393 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 DDX19AQ9NUU7 478 aaKnown RBP13.57□□□□□ -0.24
MRPL55-209ENST00000366735 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
MRPL55-209ENST00000366735 KIAA1024Q9UPX6 916 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 DNM3Q9UQ16 869 aa13.57□□□□□ -0.24
MRPL55-209ENST00000366735 RALGAPA1Q6GYQ0 2036 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 SMIM28A0A1B0GU29 152 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 ARHGEF37A1IGU5 675 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 MCF2P10911 925 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 RPL9P32969 192 aaKnown RBP13.56□□□□□ -0.24
MRPL55-209ENST00000366735 MCM4P33991 863 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 ROR1Q01973 937 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 STRN3Q13033 797 aa13.56□□□□□ -0.24
MRPL55-209ENST00000366735 PPP2R5DQ14738 602 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms