RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PPFIBP1Q86W92 1011 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 ARHGEF19Q8IW93 802 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 ANKLE1Q8NAG6 615 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 LINC01599Q8WXQ3 324 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 KAT5Q92993 513 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
CAPN9-203ENST00000366666 INTS2Q9H0H0 1204 aaKnown RBP13.19□□□□□ -0.3
CAPN9-203ENST00000366666 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 SCN1AP35498 2009 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 CAND2O75155 1236 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 ITGB8P26012 769 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 KRT9P35527 623 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 KLHDC7AQ5VTJ3 777 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 SPOPLQ6IQ16 392 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 EHBP1Q8NDI1 1231 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 NEK11Q8NG66 645 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 BAP1Q92560 729 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 ADAM2Q99965 735 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 HIPK3Q9H422 1215 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 FAM105AQ9NUU6 356 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 CAPN11Q9UMQ6 739 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 COQ4Q9Y3A0 265 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 AKR1B15C9JRZ8 316 aaPredicted RBP13.18□□□□□ -0.3
CAPN9-203ENST00000366666 TADA3O75528 432 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 UCHL3P15374 230 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 ATF7P17544 494 aaPredicted RBP13.18□□□□□ -0.3
CAPN9-203ENST00000366666 BIRC3Q13489 604 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 C1orf53Q5VUE5 145 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 RRAGAQ7L523 313 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 TMEM139Q8IV31 216 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 WDR49Q8IV35 697 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 TATDN2Q93075 761 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 SNX27Q96L92 541 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 ZFP42Q96MM3 310 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 PLAGL2Q9UPG8 496 aa13.18□□□□□ -0.3
CAPN9-203ENST00000366666 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 BFSP2Q13515 415 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 IQCEQ6IPM2 695 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 ALKAL1Q6UXT8 129 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 TRAPPC11Q7Z392 1133 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 FBXL13Q8NEE6 735 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 C18orf25Q96B23 403 aaPredicted RBP13.17□□□□□ -0.3
CAPN9-203ENST00000366666 TOX2Q96NM4 488 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 ABHD10Q9NUJ1 306 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 PARP2Q9UGN5 583 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 LRRC53A6NM62 1247 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 TLR3O15455 904 aaKnown RBP13.17□□□□□ -0.3
CAPN9-203ENST00000366666 URI1O94763 535 aaPredicted RBP13.17□□□□□ -0.3
CAPN9-203ENST00000366666 GTF2H1P32780 548 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 FIGNQ5HY92 759 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 NECAB2Q7Z6G3 386 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 USP37Q86T82 979 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 C1orf127Q8N9H9 656 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 LRRN4CLQ8ND94 238 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 DBF4BQ8NFT6 615 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 CXorf38Q8TB03 319 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 VWCEQ96DN2 955 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 NAA15Q9BXJ9 866 aaKnown RBP13.17□□□□□ -0.3
CAPN9-203ENST00000366666 PLCB1Q9NQ66 1216 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 CHST12Q9NRB3 414 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 SIX4Q9UIU6 781 aa13.17□□□□□ -0.3
CAPN9-203ENST00000366666 LUC7L2Q9Y383 392 aaKnown RBP13.17□□□□□ -0.3
CAPN9-203ENST00000366666 TDRD15B5MCY1 1934 aaKnown RBP13.16□□□□□ -0.3
CAPN9-203ENST00000366666 PMM2O15305 246 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 P4HA2O15460 535 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 STX10O60499 249 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 N4BP1O75113 896 aaKnown RBP13.16□□□□□ -0.3
CAPN9-203ENST00000366666 IL18RAPO95256 599 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 PLA2G4AP47712 749 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 ENPEPQ07075 957 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 DUOXA2Q1HG44 320 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 TEX35Q5T0J7 233 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 AGMOQ6ZNB7 445 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 UBE2Q1Q7Z7E8 422 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 NUP58Q9BVL2 599 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 GPR88Q9GZN0 384 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
CAPN9-203ENST00000366666 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 APEX2Q9UBZ4 518 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 TUBGCP4Q9UGJ1 667 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
CAPN9-203ENST00000366666 A0A1W2PQJ5 194 aa13.15□□□□□ -0.3
CAPN9-203ENST00000366666 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
CAPN9-203ENST00000366666 PTGESO14684 152 aa13.15□□□□□ -0.3
CAPN9-203ENST00000366666 PPEF2O14830 753 aa13.15□□□□□ -0.3
CAPN9-203ENST00000366666 TMEM191BP0C7N4 346 aa13.15□□□□□ -0.3
CAPN9-203ENST00000366666 IGFBP6P24592 240 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms